Gene : AT3G20510 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12668//PTHR12668:SF0 - TRANSMEMBRANE PROTEIN 14, 15 // UPF0136 MEMBRANE PROTEIN CG5532 Genomic Order:  2133
Name:  ? AT3G20510 Secondary Identifier:  ? PAC:19664078
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G20510 0.5kb upstream 0.5kb upstream 2030 true Chr3: 7160177-7162206 Arabidopsis thaliana
AT3G20510 0.5kb upstream 0.5kb upstream 500 false Chr3: 7160177-7160676 Arabidopsis thaliana
AT3G20510 0.5kb downstream 0.5kb downstream 2030 true Chr3: 7160677-7162706 Arabidopsis thaliana
AT3G20510 0.5kb downstream 0.5kb downstream 500 false Chr3: 7162207-7162706 Arabidopsis thaliana
AT3G20510 1.0kb upstream 1.0kb upstream 2530 true Chr3: 7159677-7162206 Arabidopsis thaliana
AT3G20510 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7159677-7160676 Arabidopsis thaliana
AT3G20510 1.0kb downstream 1.0kb downstream 2530 true Chr3: 7160677-7163206 Arabidopsis thaliana
AT3G20510 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7162207-7163206 Arabidopsis thaliana
AT3G20510 2.0kb upstream 2.0kb upstream 3530 true Chr3: 7158677-7162206 Arabidopsis thaliana
AT3G20510 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7158677-7160676 Arabidopsis thaliana
AT3G20510 2.0kb downstream 2.0kb downstream 3530 true Chr3: 7160677-7164206 Arabidopsis thaliana
AT3G20510 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7162207-7164206 Arabidopsis thaliana
AT3G20510 5.0kb upstream 5.0kb upstream 6530 true Chr3: 7155677-7162206 Arabidopsis thaliana
AT3G20510 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7155677-7160676 Arabidopsis thaliana
AT3G20510 5.0kb downstream 5.0kb downstream 6530 true Chr3: 7160677-7167206 Arabidopsis thaliana
AT3G20510 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7162207-7167206 Arabidopsis thaliana
AT3G20510 10.0kb upstream 10.0kb upstream 11530 true Chr3: 7150677-7162206 Arabidopsis thaliana
AT3G20510 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7150677-7160676 Arabidopsis thaliana
AT3G20510 10.0kb downstream 10.0kb downstream 11530 true Chr3: 7160677-7172206 Arabidopsis thaliana
AT3G20510 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7162207-7172206 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367270 5261 Brassicaceae View MSA
123840061 5264 Brassicales-Malvales View MSA
124344011 5266 SBM View MSA
124242311 5268 Malvidae View MSA
124062826 5270 Rosid View MSA
123744265 5271 Pentapetalae View MSA
122793169 5272 Eudicot View MSA
122043738 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.988        
cufflinks 40.01     High  
cufflinks 9.442       Low
cufflinks 41.097     High  
cufflinks 10.179       Low
cufflinks 48.597     High High

0 Strain