Gene : POLGAMMA1 A. thaliana TAIR10
Primary Identifier:  ? AT3G20540 Defline:  (1 of 2) K02335 - DNA polymerase I (DPO1, polA)
Genomic Order:  2136 Name:  ? AT3G20540
Secondary Identifier:  ? PAC:19663034
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G20540 0.5kb upstream 0.5kb upstream 5986 true Chr3: 7167632-7173617 Arabidopsis thaliana
AT3G20540 0.5kb upstream 0.5kb upstream 500 false Chr3: 7167632-7168131 Arabidopsis thaliana
AT3G20540 0.5kb downstream 0.5kb downstream 5986 true Chr3: 7168132-7174117 Arabidopsis thaliana
AT3G20540 0.5kb downstream 0.5kb downstream 500 false Chr3: 7173618-7174117 Arabidopsis thaliana
AT3G20540 1.0kb upstream 1.0kb upstream 6486 true Chr3: 7167132-7173617 Arabidopsis thaliana
AT3G20540 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7167132-7168131 Arabidopsis thaliana
AT3G20540 1.0kb downstream 1.0kb downstream 6486 true Chr3: 7168132-7174617 Arabidopsis thaliana
AT3G20540 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7173618-7174617 Arabidopsis thaliana
AT3G20540 2.0kb upstream 2.0kb upstream 7486 true Chr3: 7166132-7173617 Arabidopsis thaliana
AT3G20540 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7166132-7168131 Arabidopsis thaliana
AT3G20540 2.0kb downstream 2.0kb downstream 7486 true Chr3: 7168132-7175617 Arabidopsis thaliana
AT3G20540 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7173618-7175617 Arabidopsis thaliana
AT3G20540 5.0kb upstream 5.0kb upstream 10486 true Chr3: 7163132-7173617 Arabidopsis thaliana
AT3G20540 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7163132-7168131 Arabidopsis thaliana
AT3G20540 5.0kb downstream 5.0kb downstream 10486 true Chr3: 7168132-7178617 Arabidopsis thaliana
AT3G20540 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7173618-7178617 Arabidopsis thaliana
AT3G20540 10.0kb upstream 10.0kb upstream 15486 true Chr3: 7158132-7173617 Arabidopsis thaliana
AT3G20540 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7158132-7168131 Arabidopsis thaliana
AT3G20540 10.0kb downstream 10.0kb downstream 15486 true Chr3: 7168132-7183617 Arabidopsis thaliana
AT3G20540 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7173618-7183617 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369212 5261 Brassicaceae View MSA
123835780 5264 Brassicales-Malvales View MSA
124340724 5266 SBM View MSA
124252454 5268 Malvidae View MSA
124065087 5270 Rosid View MSA
123749681 5271 Pentapetalae View MSA
122789889 5272 Eudicot View MSA
122045132 5273 Angiosperm View MSA
121346296 5274 Embryophyte View MSA
123424126 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.239        
cufflinks 4.842        
cufflinks 3.076        
cufflinks 4.943        
cufflinks 2.535       Low
cufflinks 5.876        

0 Strain