Gene : AT3G20190 A. thaliana TAIR10
Defline:  (1 of 15) PF07714//PF08263//PF13855 - Protein tyrosine kinase (Pkinase_Tyr) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  2098
Name:  ? AT3G20190 Secondary Identifier:  ? PAC:19660438
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G20190 0.5kb upstream 0.5kb upstream 2948 true Chr3: 7044443-7047390 Arabidopsis thaliana
AT3G20190 0.5kb upstream 0.5kb upstream 500 false Chr3: 7044443-7044942 Arabidopsis thaliana
AT3G20190 0.5kb downstream 0.5kb downstream 2948 true Chr3: 7044943-7047890 Arabidopsis thaliana
AT3G20190 0.5kb downstream 0.5kb downstream 500 false Chr3: 7047391-7047890 Arabidopsis thaliana
AT3G20190 1.0kb upstream 1.0kb upstream 3448 true Chr3: 7043943-7047390 Arabidopsis thaliana
AT3G20190 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7043943-7044942 Arabidopsis thaliana
AT3G20190 1.0kb downstream 1.0kb downstream 3448 true Chr3: 7044943-7048390 Arabidopsis thaliana
AT3G20190 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7047391-7048390 Arabidopsis thaliana
AT3G20190 2.0kb upstream 2.0kb upstream 4448 true Chr3: 7042943-7047390 Arabidopsis thaliana
AT3G20190 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7042943-7044942 Arabidopsis thaliana
AT3G20190 2.0kb downstream 2.0kb downstream 4448 true Chr3: 7044943-7049390 Arabidopsis thaliana
AT3G20190 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7047391-7049390 Arabidopsis thaliana
AT3G20190 5.0kb upstream 5.0kb upstream 7448 true Chr3: 7039943-7047390 Arabidopsis thaliana
AT3G20190 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7039943-7044942 Arabidopsis thaliana
AT3G20190 5.0kb downstream 5.0kb downstream 7448 true Chr3: 7044943-7052390 Arabidopsis thaliana
AT3G20190 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7047391-7052390 Arabidopsis thaliana
AT3G20190 10.0kb upstream 10.0kb upstream 12448 true Chr3: 7034943-7047390 Arabidopsis thaliana
AT3G20190 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7034943-7044942 Arabidopsis thaliana
AT3G20190 10.0kb downstream 10.0kb downstream 12448 true Chr3: 7044943-7057390 Arabidopsis thaliana
AT3G20190 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7047391-7057390 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371878 5261 Brassicaceae View MSA
123840942 5264 Brassicales-Malvales View MSA
124345299 5266 SBM View MSA
124237783 5268 Malvidae View MSA
124074219 5270 Rosid View MSA
123750031 5271 Pentapetalae View MSA
122795322 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.048     Low  
cufflinks 1.681       High
cufflinks 0.061     Low  
cufflinks 1.13        
cufflinks 0.031     Low Low
cufflinks 1.227        

0 Strain