Gene : AT3G20010 A. thaliana TAIR10
Defline:  (1 of 3) PTHR10799:SF777 - DNA-BINDING PROTEIN-RELATED Genomic Order:  2078
Name:  ? AT3G20010 Secondary Identifier:  ? PAC:19661186
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G20010 0.5kb upstream 0.5kb upstream 5744 true Chr3: 6970852-6976595 Arabidopsis thaliana
AT3G20010 0.5kb upstream 0.5kb upstream 500 false Chr3: 6970852-6971351 Arabidopsis thaliana
AT3G20010 0.5kb downstream 0.5kb downstream 5744 true Chr3: 6971352-6977095 Arabidopsis thaliana
AT3G20010 0.5kb downstream 0.5kb downstream 500 false Chr3: 6976596-6977095 Arabidopsis thaliana
AT3G20010 1.0kb upstream 1.0kb upstream 6244 true Chr3: 6970352-6976595 Arabidopsis thaliana
AT3G20010 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6970352-6971351 Arabidopsis thaliana
AT3G20010 1.0kb downstream 1.0kb downstream 6244 true Chr3: 6971352-6977595 Arabidopsis thaliana
AT3G20010 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6976596-6977595 Arabidopsis thaliana
AT3G20010 2.0kb upstream 2.0kb upstream 7244 true Chr3: 6969352-6976595 Arabidopsis thaliana
AT3G20010 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6969352-6971351 Arabidopsis thaliana
AT3G20010 2.0kb downstream 2.0kb downstream 7244 true Chr3: 6971352-6978595 Arabidopsis thaliana
AT3G20010 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6976596-6978595 Arabidopsis thaliana
AT3G20010 5.0kb upstream 5.0kb upstream 10244 true Chr3: 6966352-6976595 Arabidopsis thaliana
AT3G20010 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6966352-6971351 Arabidopsis thaliana
AT3G20010 5.0kb downstream 5.0kb downstream 10244 true Chr3: 6971352-6981595 Arabidopsis thaliana
AT3G20010 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6976596-6981595 Arabidopsis thaliana
AT3G20010 10.0kb upstream 10.0kb upstream 15244 true Chr3: 6961352-6976595 Arabidopsis thaliana
AT3G20010 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6961352-6971351 Arabidopsis thaliana
AT3G20010 10.0kb downstream 10.0kb downstream 15244 true Chr3: 6971352-6986595 Arabidopsis thaliana
AT3G20010 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6976596-6986595 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375458 5261 Brassicaceae View MSA
123838915 5264 Brassicales-Malvales View MSA
124322517 5266 SBM View MSA
124253553 5268 Malvidae View MSA
124061950 5270 Rosid View MSA
123743862 5271 Pentapetalae View MSA
122797067 5272 Eudicot View MSA
122048342 5273 Angiosperm View MSA
121347136 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.154        
cufflinks 6.084        
cufflinks 2.967        
cufflinks 6.95       High
cufflinks 2.481       Low
cufflinks 5.606        

0 Strain