Gene : UBC19 A. thaliana TAIR10
Primary Identifier:  ? AT3G20060 Defline:  (1 of 1) PTHR24067//PTHR24067:SF121//PTHR24067:SF44 - UBIQUITIN-CONJUGATING ENZYME E2 // SUBFAMILY NOT NAMED // UBIQUITIN-CONJUGATING ENZYME E2 C
Genomic Order:  2084 Name:  ? AT3G20060
Secondary Identifier:  ? PAC:19663612
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7511 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G20060 0.5kb upstream 0.5kb upstream 2134 true Chr3: 7002817-7004950 Arabidopsis thaliana
AT3G20060 0.5kb upstream 0.5kb upstream 500 false Chr3: 7004451-7004950 Arabidopsis thaliana
AT3G20060 0.5kb downstream 0.5kb downstream 2134 true Chr3: 7002317-7004450 Arabidopsis thaliana
AT3G20060 0.5kb downstream 0.5kb downstream 500 false Chr3: 7002317-7002816 Arabidopsis thaliana
AT3G20060 1.0kb upstream 1.0kb upstream 2634 true Chr3: 7002817-7005450 Arabidopsis thaliana
AT3G20060 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7004451-7005450 Arabidopsis thaliana
AT3G20060 1.0kb downstream 1.0kb downstream 2634 true Chr3: 7001817-7004450 Arabidopsis thaliana
AT3G20060 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7001817-7002816 Arabidopsis thaliana
AT3G20060 2.0kb upstream 2.0kb upstream 3634 true Chr3: 7002817-7006450 Arabidopsis thaliana
AT3G20060 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7004451-7006450 Arabidopsis thaliana
AT3G20060 2.0kb downstream 2.0kb downstream 3634 true Chr3: 7000817-7004450 Arabidopsis thaliana
AT3G20060 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7000817-7002816 Arabidopsis thaliana
AT3G20060 5.0kb upstream 5.0kb upstream 6634 true Chr3: 7002817-7009450 Arabidopsis thaliana
AT3G20060 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7004451-7009450 Arabidopsis thaliana
AT3G20060 5.0kb downstream 5.0kb downstream 6634 true Chr3: 6997817-7004450 Arabidopsis thaliana
AT3G20060 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6997817-7002816 Arabidopsis thaliana
AT3G20060 10.0kb upstream 10.0kb upstream 11634 true Chr3: 7002817-7014450 Arabidopsis thaliana
AT3G20060 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7004451-7014450 Arabidopsis thaliana
AT3G20060 10.0kb downstream 10.0kb downstream 11634 true Chr3: 6992817-7004450 Arabidopsis thaliana
AT3G20060 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6992817-7002816 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378746 5261 Brassicaceae View MSA
123838520 5264 Brassicales-Malvales View MSA
124340055 5266 SBM View MSA
124250990 5268 Malvidae View MSA
124064944 5270 Rosid View MSA
123741729 5271 Pentapetalae View MSA
122792532 5272 Eudicot View MSA
122046674 5273 Angiosperm View MSA
121349130 5274 Embryophyte View MSA
123424862 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.744        
cufflinks 12.454        
cufflinks 20.622        
cufflinks 11.459       Low
cufflinks 22.261       High
cufflinks 14.408        

0 Strain