Gene : AT3G20260 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10759//PTHR10759:SF4 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED Genomic Order:  2105
Name:  ? AT3G20260 Secondary Identifier:  ? PAC:19661806
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G20260 0.5kb upstream 0.5kb upstream 2950 true Chr3: 7064054-7067003 Arabidopsis thaliana
AT3G20260 0.5kb upstream 0.5kb upstream 500 false Chr3: 7066504-7067003 Arabidopsis thaliana
AT3G20260 0.5kb downstream 0.5kb downstream 2950 true Chr3: 7063554-7066503 Arabidopsis thaliana
AT3G20260 0.5kb downstream 0.5kb downstream 500 false Chr3: 7063554-7064053 Arabidopsis thaliana
AT3G20260 1.0kb upstream 1.0kb upstream 3450 true Chr3: 7064054-7067503 Arabidopsis thaliana
AT3G20260 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7066504-7067503 Arabidopsis thaliana
AT3G20260 1.0kb downstream 1.0kb downstream 3450 true Chr3: 7063054-7066503 Arabidopsis thaliana
AT3G20260 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7063054-7064053 Arabidopsis thaliana
AT3G20260 2.0kb upstream 2.0kb upstream 4450 true Chr3: 7064054-7068503 Arabidopsis thaliana
AT3G20260 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7066504-7068503 Arabidopsis thaliana
AT3G20260 2.0kb downstream 2.0kb downstream 4450 true Chr3: 7062054-7066503 Arabidopsis thaliana
AT3G20260 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7062054-7064053 Arabidopsis thaliana
AT3G20260 5.0kb upstream 5.0kb upstream 7450 true Chr3: 7064054-7071503 Arabidopsis thaliana
AT3G20260 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7066504-7071503 Arabidopsis thaliana
AT3G20260 5.0kb downstream 5.0kb downstream 7450 true Chr3: 7059054-7066503 Arabidopsis thaliana
AT3G20260 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7059054-7064053 Arabidopsis thaliana
AT3G20260 10.0kb upstream 10.0kb upstream 12450 true Chr3: 7064054-7076503 Arabidopsis thaliana
AT3G20260 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7066504-7076503 Arabidopsis thaliana
AT3G20260 10.0kb downstream 10.0kb downstream 12450 true Chr3: 7054054-7066503 Arabidopsis thaliana
AT3G20260 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7054054-7064053 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367040 5261 Brassicaceae View MSA
123834616 5264 Brassicales-Malvales View MSA
124321955 5266 SBM View MSA
124238631 5268 Malvidae View MSA
124064298 5270 Rosid View MSA
123747656 5271 Pentapetalae View MSA
122792050 5272 Eudicot View MSA
122050255 5273 Angiosperm View MSA
121311827 5274 Embryophyte View MSA
123349068 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.076        
cufflinks 23.915        
cufflinks 2.564        
cufflinks 21.117        
cufflinks 2.042       Low
cufflinks 26.671        

0 Strain