Gene : NTMC2T5.2 A. thaliana TAIR10
Primary Identifier:  ? AT3G19830 Defline:  (1 of 2) PTHR10774//PTHR10774:SF82 - EXTENDED SYNAPTOTAGMIN-RELATED // SUBFAMILY NOT NAMED
Genomic Order:  2059 Name:  ? AT3G19830
Secondary Identifier:  ? PAC:19659052
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G19830 0.5kb upstream 0.5kb upstream 4959 true Chr3: 6885606-6890564 Arabidopsis thaliana
AT3G19830 0.5kb upstream 0.5kb upstream 500 false Chr3: 6890065-6890564 Arabidopsis thaliana
AT3G19830 0.5kb downstream 0.5kb downstream 4959 true Chr3: 6885106-6890064 Arabidopsis thaliana
AT3G19830 0.5kb downstream 0.5kb downstream 500 false Chr3: 6885106-6885605 Arabidopsis thaliana
AT3G19830 1.0kb upstream 1.0kb upstream 5459 true Chr3: 6885606-6891064 Arabidopsis thaliana
AT3G19830 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6890065-6891064 Arabidopsis thaliana
AT3G19830 1.0kb downstream 1.0kb downstream 5459 true Chr3: 6884606-6890064 Arabidopsis thaliana
AT3G19830 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6884606-6885605 Arabidopsis thaliana
AT3G19830 2.0kb upstream 2.0kb upstream 6459 true Chr3: 6885606-6892064 Arabidopsis thaliana
AT3G19830 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6890065-6892064 Arabidopsis thaliana
AT3G19830 2.0kb downstream 2.0kb downstream 6459 true Chr3: 6883606-6890064 Arabidopsis thaliana
AT3G19830 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6883606-6885605 Arabidopsis thaliana
AT3G19830 5.0kb upstream 5.0kb upstream 9459 true Chr3: 6885606-6895064 Arabidopsis thaliana
AT3G19830 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6890065-6895064 Arabidopsis thaliana
AT3G19830 5.0kb downstream 5.0kb downstream 9459 true Chr3: 6880606-6890064 Arabidopsis thaliana
AT3G19830 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6880606-6885605 Arabidopsis thaliana
AT3G19830 10.0kb upstream 10.0kb upstream 14459 true Chr3: 6885606-6900064 Arabidopsis thaliana
AT3G19830 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6890065-6900064 Arabidopsis thaliana
AT3G19830 10.0kb downstream 10.0kb downstream 14459 true Chr3: 6875606-6890064 Arabidopsis thaliana
AT3G19830 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6875606-6885605 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371302 5261 Brassicaceae View MSA
123840633 5264 Brassicales-Malvales View MSA
124344005 5266 SBM View MSA
124244060 5268 Malvidae View MSA
124061205 5270 Rosid View MSA
123738093 5271 Pentapetalae View MSA
122787602 5272 Eudicot View MSA
122047989 5273 Angiosperm View MSA
121348043 5274 Embryophyte View MSA
123426987 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.218        
cufflinks 4.982        
cufflinks 6.008       High
cufflinks 4.187        
cufflinks 4.195        
cufflinks 4.555        

0 Strain