Gene : AT3G19850 A. thaliana TAIR10
Defline:  (1 of 24) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  2061
Name:  ? AT3G19850 Secondary Identifier:  ? PAC:19662120
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G19850 0.5kb upstream 0.5kb upstream 3575 true Chr3: 6898181-6901755 Arabidopsis thaliana
AT3G19850 0.5kb upstream 0.5kb upstream 500 false Chr3: 6901256-6901755 Arabidopsis thaliana
AT3G19850 0.5kb downstream 0.5kb downstream 3575 true Chr3: 6897681-6901255 Arabidopsis thaliana
AT3G19850 0.5kb downstream 0.5kb downstream 500 false Chr3: 6897681-6898180 Arabidopsis thaliana
AT3G19850 1.0kb upstream 1.0kb upstream 4075 true Chr3: 6898181-6902255 Arabidopsis thaliana
AT3G19850 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6901256-6902255 Arabidopsis thaliana
AT3G19850 1.0kb downstream 1.0kb downstream 4075 true Chr3: 6897181-6901255 Arabidopsis thaliana
AT3G19850 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6897181-6898180 Arabidopsis thaliana
AT3G19850 2.0kb upstream 2.0kb upstream 5075 true Chr3: 6898181-6903255 Arabidopsis thaliana
AT3G19850 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6901256-6903255 Arabidopsis thaliana
AT3G19850 2.0kb downstream 2.0kb downstream 5075 true Chr3: 6896181-6901255 Arabidopsis thaliana
AT3G19850 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6896181-6898180 Arabidopsis thaliana
AT3G19850 5.0kb upstream 5.0kb upstream 8075 true Chr3: 6898181-6906255 Arabidopsis thaliana
AT3G19850 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6901256-6906255 Arabidopsis thaliana
AT3G19850 5.0kb downstream 5.0kb downstream 8075 true Chr3: 6893181-6901255 Arabidopsis thaliana
AT3G19850 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6893181-6898180 Arabidopsis thaliana
AT3G19850 10.0kb upstream 10.0kb upstream 13075 true Chr3: 6898181-6911255 Arabidopsis thaliana
AT3G19850 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6901256-6911255 Arabidopsis thaliana
AT3G19850 10.0kb downstream 10.0kb downstream 13075 true Chr3: 6888181-6901255 Arabidopsis thaliana
AT3G19850 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6888181-6898180 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374363 5261 Brassicaceae View MSA
123828546 5264 Brassicales-Malvales View MSA
124338741 5266 SBM View MSA
124247811 5268 Malvidae View MSA
124071216 5270 Rosid View MSA
123750783 5271 Pentapetalae View MSA
122794459 5272 Eudicot View MSA
122048386 5273 Angiosperm View MSA
121349864 5274 Embryophyte View MSA
123381475 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.51       High
cufflinks 1.044        
cufflinks 15.05        
cufflinks 0.94        
cufflinks 12.334        
cufflinks 1.099        

0 Strain