Gene : AT3G19800 A. thaliana TAIR10
Defline:  (1 of 2) PF02620 - Uncharacterized ACR, COG1399 (DUF177) Genomic Order:  2056
Name:  ? AT3G19800 Secondary Identifier:  ? PAC:19663304
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G19800 0.5kb upstream 0.5kb upstream 2064 true Chr3: 6875579-6877642 Arabidopsis thaliana
AT3G19800 0.5kb upstream 0.5kb upstream 500 false Chr3: 6875579-6876078 Arabidopsis thaliana
AT3G19800 0.5kb downstream 0.5kb downstream 2064 true Chr3: 6876079-6878142 Arabidopsis thaliana
AT3G19800 0.5kb downstream 0.5kb downstream 500 false Chr3: 6877643-6878142 Arabidopsis thaliana
AT3G19800 1.0kb upstream 1.0kb upstream 2564 true Chr3: 6875079-6877642 Arabidopsis thaliana
AT3G19800 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6875079-6876078 Arabidopsis thaliana
AT3G19800 1.0kb downstream 1.0kb downstream 2564 true Chr3: 6876079-6878642 Arabidopsis thaliana
AT3G19800 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6877643-6878642 Arabidopsis thaliana
AT3G19800 2.0kb upstream 2.0kb upstream 3564 true Chr3: 6874079-6877642 Arabidopsis thaliana
AT3G19800 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6874079-6876078 Arabidopsis thaliana
AT3G19800 2.0kb downstream 2.0kb downstream 3564 true Chr3: 6876079-6879642 Arabidopsis thaliana
AT3G19800 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6877643-6879642 Arabidopsis thaliana
AT3G19800 5.0kb upstream 5.0kb upstream 6564 true Chr3: 6871079-6877642 Arabidopsis thaliana
AT3G19800 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6871079-6876078 Arabidopsis thaliana
AT3G19800 5.0kb downstream 5.0kb downstream 6564 true Chr3: 6876079-6882642 Arabidopsis thaliana
AT3G19800 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6877643-6882642 Arabidopsis thaliana
AT3G19800 10.0kb upstream 10.0kb upstream 11564 true Chr3: 6866079-6877642 Arabidopsis thaliana
AT3G19800 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6866079-6876078 Arabidopsis thaliana
AT3G19800 10.0kb downstream 10.0kb downstream 11564 true Chr3: 6876079-6887642 Arabidopsis thaliana
AT3G19800 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6877643-6887642 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026421 5273 Angiosperm View MSA
122363333 5261 Brassicaceae View MSA
123828445 5264 Brassicales-Malvales View MSA
124338124 5266 SBM View MSA
124253101 5268 Malvidae View MSA
124066454 5270 Rosid View MSA
123747479 5271 Pentapetalae View MSA
122790250 5272 Eudicot View MSA
121347098 5274 Embryophyte View MSA
123380492 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.326        
cufflinks 0.02     Low  
cufflinks 18.383        
cufflinks 0.077     Low  
cufflinks 17.48        
cufflinks 0.01     Low Low

0 Strain