Gene : AT3G19570 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED Genomic Order:  2032
Name:  ? AT3G19570 Secondary Identifier:  ? PAC:19662597
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G19570 0.5kb upstream 0.5kb upstream 4756 true Chr3: 6796985-6801740 Arabidopsis thaliana
AT3G19570 0.5kb upstream 0.5kb upstream 500 false Chr3: 6796985-6797484 Arabidopsis thaliana
AT3G19570 0.5kb downstream 0.5kb downstream 4756 true Chr3: 6797485-6802240 Arabidopsis thaliana
AT3G19570 0.5kb downstream 0.5kb downstream 500 false Chr3: 6801741-6802240 Arabidopsis thaliana
AT3G19570 1.0kb upstream 1.0kb upstream 5256 true Chr3: 6796485-6801740 Arabidopsis thaliana
AT3G19570 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6796485-6797484 Arabidopsis thaliana
AT3G19570 1.0kb downstream 1.0kb downstream 5256 true Chr3: 6797485-6802740 Arabidopsis thaliana
AT3G19570 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6801741-6802740 Arabidopsis thaliana
AT3G19570 2.0kb upstream 2.0kb upstream 6256 true Chr3: 6795485-6801740 Arabidopsis thaliana
AT3G19570 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6795485-6797484 Arabidopsis thaliana
AT3G19570 2.0kb downstream 2.0kb downstream 6256 true Chr3: 6797485-6803740 Arabidopsis thaliana
AT3G19570 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6801741-6803740 Arabidopsis thaliana
AT3G19570 5.0kb upstream 5.0kb upstream 9256 true Chr3: 6792485-6801740 Arabidopsis thaliana
AT3G19570 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6792485-6797484 Arabidopsis thaliana
AT3G19570 5.0kb downstream 5.0kb downstream 9256 true Chr3: 6797485-6806740 Arabidopsis thaliana
AT3G19570 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6801741-6806740 Arabidopsis thaliana
AT3G19570 10.0kb upstream 10.0kb upstream 14256 true Chr3: 6787485-6801740 Arabidopsis thaliana
AT3G19570 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6787485-6797484 Arabidopsis thaliana
AT3G19570 10.0kb downstream 10.0kb downstream 14256 true Chr3: 6797485-6811740 Arabidopsis thaliana
AT3G19570 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6801741-6811740 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368125 5261 Brassicaceae View MSA
123799496 5264 Brassicales-Malvales View MSA
124297011 5266 SBM View MSA
124149010 5268 Malvidae View MSA
124065184 5270 Rosid View MSA
123747124 5271 Pentapetalae View MSA
122796341 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.973        
cufflinks 2.399        
cufflinks 1.507       Low
cufflinks 2.088        
cufflinks 1.427       Low
cufflinks 2.865       High

0 Strain