Gene : AT3G19620 A. thaliana TAIR10
Defline:  (1 of 1) PTHR30620//PTHR30620:SF31 - PERIPLASMIC BETA-GLUCOSIDASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2039
Name:  ? AT3G19620 Secondary Identifier:  ? PAC:19660070
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G19620 0.5kb upstream 0.5kb upstream 3196 true Chr3: 6815613-6818808 Arabidopsis thaliana
AT3G19620 0.5kb upstream 0.5kb upstream 500 false Chr3: 6818309-6818808 Arabidopsis thaliana
AT3G19620 0.5kb downstream 0.5kb downstream 3196 true Chr3: 6815113-6818308 Arabidopsis thaliana
AT3G19620 0.5kb downstream 0.5kb downstream 500 false Chr3: 6815113-6815612 Arabidopsis thaliana
AT3G19620 1.0kb upstream 1.0kb upstream 3696 true Chr3: 6815613-6819308 Arabidopsis thaliana
AT3G19620 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6818309-6819308 Arabidopsis thaliana
AT3G19620 1.0kb downstream 1.0kb downstream 3696 true Chr3: 6814613-6818308 Arabidopsis thaliana
AT3G19620 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6814613-6815612 Arabidopsis thaliana
AT3G19620 2.0kb upstream 2.0kb upstream 4696 true Chr3: 6815613-6820308 Arabidopsis thaliana
AT3G19620 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6818309-6820308 Arabidopsis thaliana
AT3G19620 2.0kb downstream 2.0kb downstream 4696 true Chr3: 6813613-6818308 Arabidopsis thaliana
AT3G19620 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6813613-6815612 Arabidopsis thaliana
AT3G19620 5.0kb upstream 5.0kb upstream 7696 true Chr3: 6815613-6823308 Arabidopsis thaliana
AT3G19620 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6818309-6823308 Arabidopsis thaliana
AT3G19620 5.0kb downstream 5.0kb downstream 7696 true Chr3: 6810613-6818308 Arabidopsis thaliana
AT3G19620 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6810613-6815612 Arabidopsis thaliana
AT3G19620 10.0kb upstream 10.0kb upstream 12696 true Chr3: 6815613-6828308 Arabidopsis thaliana
AT3G19620 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6818309-6828308 Arabidopsis thaliana
AT3G19620 10.0kb downstream 10.0kb downstream 12696 true Chr3: 6805613-6818308 Arabidopsis thaliana
AT3G19620 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6805613-6815612 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369614 5261 Brassicaceae View MSA
123830819 5264 Brassicales-Malvales View MSA
124342081 5266 SBM View MSA
124244570 5268 Malvidae View MSA
124067440 5270 Rosid View MSA
123741609 5271 Pentapetalae View MSA
122789440 5272 Eudicot View MSA
122043210 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.499        
cufflinks 0.232     Low  
cufflinks 2.92        
cufflinks 0.272     Low  
cufflinks 3.132        
cufflinks 0.187     Low Low

0 Strain