Gene : AT3G19020 A. thaliana TAIR10
Defline:  (1 of 3) PTHR32093:SF23 - LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED Genomic Order:  1971
Name:  ? AT3G19020 Secondary Identifier:  ? PAC:19664355
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G19020 0.5kb upstream 0.5kb upstream 3647 true Chr3: 6558973-6562619 Arabidopsis thaliana
AT3G19020 0.5kb upstream 0.5kb upstream 500 false Chr3: 6562120-6562619 Arabidopsis thaliana
AT3G19020 0.5kb downstream 0.5kb downstream 3647 true Chr3: 6558473-6562119 Arabidopsis thaliana
AT3G19020 0.5kb downstream 0.5kb downstream 500 false Chr3: 6558473-6558972 Arabidopsis thaliana
AT3G19020 1.0kb upstream 1.0kb upstream 4147 true Chr3: 6558973-6563119 Arabidopsis thaliana
AT3G19020 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6562120-6563119 Arabidopsis thaliana
AT3G19020 1.0kb downstream 1.0kb downstream 4147 true Chr3: 6557973-6562119 Arabidopsis thaliana
AT3G19020 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6557973-6558972 Arabidopsis thaliana
AT3G19020 2.0kb upstream 2.0kb upstream 5147 true Chr3: 6558973-6564119 Arabidopsis thaliana
AT3G19020 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6562120-6564119 Arabidopsis thaliana
AT3G19020 2.0kb downstream 2.0kb downstream 5147 true Chr3: 6556973-6562119 Arabidopsis thaliana
AT3G19020 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6556973-6558972 Arabidopsis thaliana
AT3G19020 5.0kb upstream 5.0kb upstream 8147 true Chr3: 6558973-6567119 Arabidopsis thaliana
AT3G19020 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6562120-6567119 Arabidopsis thaliana
AT3G19020 5.0kb downstream 5.0kb downstream 8147 true Chr3: 6553973-6562119 Arabidopsis thaliana
AT3G19020 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6553973-6558972 Arabidopsis thaliana
AT3G19020 10.0kb upstream 10.0kb upstream 13147 true Chr3: 6558973-6572119 Arabidopsis thaliana
AT3G19020 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6562120-6572119 Arabidopsis thaliana
AT3G19020 10.0kb downstream 10.0kb downstream 13147 true Chr3: 6548973-6562119 Arabidopsis thaliana
AT3G19020 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6548973-6558972 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380321 5261 Brassicaceae View MSA
123841495 5264 Brassicales-Malvales View MSA
124351661 5266 SBM View MSA
124254554 5268 Malvidae View MSA
124074520 5270 Rosid View MSA
123751287 5271 Pentapetalae View MSA
122794768 5272 Eudicot View MSA
122048760 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121349764 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.046     Low  
cufflinks 0.053     Low  
cufflinks 0.024     Low  
cufflinks 0.163     Low  
cufflinks 0.019     Low Low
cufflinks 0.279     Low High

0 Strain