Gene : AT3G18600 A. thaliana TAIR10
Defline:  (1 of 3) K13179 - ATP-dependent RNA helicase DDX18/HAS1 [EC:3.6.4.13] (DDX18, HAS1) Genomic Order:  1926
Name:  ? AT3G18600 Secondary Identifier:  ? PAC:19661141
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G18600 0.5kb upstream 0.5kb upstream 4278 true Chr3: 6399571-6403848 Arabidopsis thaliana
AT3G18600 0.5kb upstream 0.5kb upstream 500 false Chr3: 6403349-6403848 Arabidopsis thaliana
AT3G18600 0.5kb downstream 0.5kb downstream 4278 true Chr3: 6399071-6403348 Arabidopsis thaliana
AT3G18600 0.5kb downstream 0.5kb downstream 500 false Chr3: 6399071-6399570 Arabidopsis thaliana
AT3G18600 1.0kb upstream 1.0kb upstream 4778 true Chr3: 6399571-6404348 Arabidopsis thaliana
AT3G18600 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6403349-6404348 Arabidopsis thaliana
AT3G18600 1.0kb downstream 1.0kb downstream 4778 true Chr3: 6398571-6403348 Arabidopsis thaliana
AT3G18600 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6398571-6399570 Arabidopsis thaliana
AT3G18600 2.0kb upstream 2.0kb upstream 5778 true Chr3: 6399571-6405348 Arabidopsis thaliana
AT3G18600 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6403349-6405348 Arabidopsis thaliana
AT3G18600 2.0kb downstream 2.0kb downstream 5778 true Chr3: 6397571-6403348 Arabidopsis thaliana
AT3G18600 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6397571-6399570 Arabidopsis thaliana
AT3G18600 5.0kb upstream 5.0kb upstream 8778 true Chr3: 6399571-6408348 Arabidopsis thaliana
AT3G18600 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6403349-6408348 Arabidopsis thaliana
AT3G18600 5.0kb downstream 5.0kb downstream 8778 true Chr3: 6394571-6403348 Arabidopsis thaliana
AT3G18600 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6394571-6399570 Arabidopsis thaliana
AT3G18600 10.0kb upstream 10.0kb upstream 13778 true Chr3: 6399571-6413348 Arabidopsis thaliana
AT3G18600 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6403349-6413348 Arabidopsis thaliana
AT3G18600 10.0kb downstream 10.0kb downstream 13778 true Chr3: 6389571-6403348 Arabidopsis thaliana
AT3G18600 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6389571-6399570 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363767 5261 Brassicaceae View MSA
123836200 5264 Brassicales-Malvales View MSA
124340448 5266 SBM View MSA
124242480 5268 Malvidae View MSA
124062286 5270 Rosid View MSA
123738458 5271 Pentapetalae View MSA
122788129 5272 Eudicot View MSA
122047465 5273 Angiosperm View MSA
121344633 5274 Embryophyte View MSA
123424646 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.805        
cufflinks 11.733        
cufflinks 5.303        
cufflinks 14.27        
cufflinks 4.121       Low
cufflinks 15.897       High

0 Strain