Gene : AT3G18580 A. thaliana TAIR10
Defline:  (1 of 1) K03111 - single-strand DNA-binding protein (ssb) Genomic Order:  1924
Name:  ? AT3G18580 Secondary Identifier:  ? PAC:19663189
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G18580 0.5kb upstream 0.5kb upstream 1760 true Chr3: 6396931-6398690 Arabidopsis thaliana
AT3G18580 0.5kb upstream 0.5kb upstream 500 false Chr3: 6398191-6398690 Arabidopsis thaliana
AT3G18580 0.5kb downstream 0.5kb downstream 1760 true Chr3: 6396431-6398190 Arabidopsis thaliana
AT3G18580 0.5kb downstream 0.5kb downstream 500 false Chr3: 6396431-6396930 Arabidopsis thaliana
AT3G18580 1.0kb upstream 1.0kb upstream 2260 true Chr3: 6396931-6399190 Arabidopsis thaliana
AT3G18580 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6398191-6399190 Arabidopsis thaliana
AT3G18580 1.0kb downstream 1.0kb downstream 2260 true Chr3: 6395931-6398190 Arabidopsis thaliana
AT3G18580 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6395931-6396930 Arabidopsis thaliana
AT3G18580 2.0kb upstream 2.0kb upstream 3260 true Chr3: 6396931-6400190 Arabidopsis thaliana
AT3G18580 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6398191-6400190 Arabidopsis thaliana
AT3G18580 2.0kb downstream 2.0kb downstream 3260 true Chr3: 6394931-6398190 Arabidopsis thaliana
AT3G18580 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6394931-6396930 Arabidopsis thaliana
AT3G18580 5.0kb upstream 5.0kb upstream 6260 true Chr3: 6396931-6403190 Arabidopsis thaliana
AT3G18580 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6398191-6403190 Arabidopsis thaliana
AT3G18580 5.0kb downstream 5.0kb downstream 6260 true Chr3: 6391931-6398190 Arabidopsis thaliana
AT3G18580 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6391931-6396930 Arabidopsis thaliana
AT3G18580 10.0kb upstream 10.0kb upstream 11260 true Chr3: 6396931-6408190 Arabidopsis thaliana
AT3G18580 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6398191-6408190 Arabidopsis thaliana
AT3G18580 10.0kb downstream 10.0kb downstream 11260 true Chr3: 6386931-6398190 Arabidopsis thaliana
AT3G18580 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6386931-6396930 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371351 5261 Brassicaceae View MSA
123840531 5264 Brassicales-Malvales View MSA
124339671 5266 SBM View MSA
124240971 5268 Malvidae View MSA
124065076 5270 Rosid View MSA
123739023 5271 Pentapetalae View MSA
122787839 5272 Eudicot View MSA
122045301 5273 Angiosperm View MSA
121349645 5274 Embryophyte View MSA
123381385 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.28        
cufflinks 6.473        
cufflinks 5.11       Low
cufflinks 6.546        
cufflinks 4.816       Low
cufflinks 7.324        

0 Strain