Gene : AT3G17920 A. thaliana TAIR10
Defline:  (1 of 2) PTHR15454:SF7 - SERINE/THREONINE-PROTEIN KINASE 11-INTERACTING PROTEIN Genomic Order:  1849
Name:  ? AT3G17920 Secondary Identifier:  ? PAC:19662226
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G17920 0.5kb upstream 0.5kb upstream 5269 true Chr3: 6136755-6142023 Arabidopsis thaliana
AT3G17920 0.5kb upstream 0.5kb upstream 500 false Chr3: 6136755-6137254 Arabidopsis thaliana
AT3G17920 0.5kb downstream 0.5kb downstream 5269 true Chr3: 6137255-6142523 Arabidopsis thaliana
AT3G17920 0.5kb downstream 0.5kb downstream 500 false Chr3: 6142024-6142523 Arabidopsis thaliana
AT3G17920 1.0kb upstream 1.0kb upstream 5769 true Chr3: 6136255-6142023 Arabidopsis thaliana
AT3G17920 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6136255-6137254 Arabidopsis thaliana
AT3G17920 1.0kb downstream 1.0kb downstream 5769 true Chr3: 6137255-6143023 Arabidopsis thaliana
AT3G17920 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6142024-6143023 Arabidopsis thaliana
AT3G17920 2.0kb upstream 2.0kb upstream 6769 true Chr3: 6135255-6142023 Arabidopsis thaliana
AT3G17920 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6135255-6137254 Arabidopsis thaliana
AT3G17920 2.0kb downstream 2.0kb downstream 6769 true Chr3: 6137255-6144023 Arabidopsis thaliana
AT3G17920 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6142024-6144023 Arabidopsis thaliana
AT3G17920 5.0kb upstream 5.0kb upstream 9769 true Chr3: 6132255-6142023 Arabidopsis thaliana
AT3G17920 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6132255-6137254 Arabidopsis thaliana
AT3G17920 5.0kb downstream 5.0kb downstream 9769 true Chr3: 6137255-6147023 Arabidopsis thaliana
AT3G17920 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6142024-6147023 Arabidopsis thaliana
AT3G17920 10.0kb upstream 10.0kb upstream 14769 true Chr3: 6127255-6142023 Arabidopsis thaliana
AT3G17920 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6127255-6137254 Arabidopsis thaliana
AT3G17920 10.0kb downstream 10.0kb downstream 14769 true Chr3: 6137255-6152023 Arabidopsis thaliana
AT3G17920 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6142024-6152023 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366639 5261 Brassicaceae View MSA
123836421 5264 Brassicales-Malvales View MSA
124337466 5266 SBM View MSA
124240168 5268 Malvidae View MSA
124068979 5270 Rosid View MSA
123746713 5271 Pentapetalae View MSA
122789922 5272 Eudicot View MSA
122043032 5273 Angiosperm View MSA
121348804 5274 Embryophyte View MSA
123427587 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.626        
cufflinks 4.362        
cufflinks 2.532       Low
cufflinks 3.775        
cufflinks 2.903        
cufflinks 4.579       High

0 Strain