Gene : AT3G17930 A. thaliana TAIR10
Defline:  (1 of 1) PF11460 - Protein of unknown function (DUF3007) (DUF3007) Genomic Order:  1850
Name:  ? AT3G17930 Secondary Identifier:  ? PAC:19662735
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G17930 0.5kb upstream 0.5kb upstream 1682 true Chr3: 6142129-6143810 Arabidopsis thaliana
AT3G17930 0.5kb upstream 0.5kb upstream 500 false Chr3: 6143311-6143810 Arabidopsis thaliana
AT3G17930 0.5kb downstream 0.5kb downstream 1682 true Chr3: 6141629-6143310 Arabidopsis thaliana
AT3G17930 0.5kb downstream 0.5kb downstream 500 false Chr3: 6141629-6142128 Arabidopsis thaliana
AT3G17930 1.0kb upstream 1.0kb upstream 2182 true Chr3: 6142129-6144310 Arabidopsis thaliana
AT3G17930 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6143311-6144310 Arabidopsis thaliana
AT3G17930 1.0kb downstream 1.0kb downstream 2182 true Chr3: 6141129-6143310 Arabidopsis thaliana
AT3G17930 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6141129-6142128 Arabidopsis thaliana
AT3G17930 2.0kb upstream 2.0kb upstream 3182 true Chr3: 6142129-6145310 Arabidopsis thaliana
AT3G17930 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6143311-6145310 Arabidopsis thaliana
AT3G17930 2.0kb downstream 2.0kb downstream 3182 true Chr3: 6140129-6143310 Arabidopsis thaliana
AT3G17930 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6140129-6142128 Arabidopsis thaliana
AT3G17930 5.0kb upstream 5.0kb upstream 6182 true Chr3: 6142129-6148310 Arabidopsis thaliana
AT3G17930 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6143311-6148310 Arabidopsis thaliana
AT3G17930 5.0kb downstream 5.0kb downstream 6182 true Chr3: 6137129-6143310 Arabidopsis thaliana
AT3G17930 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6137129-6142128 Arabidopsis thaliana
AT3G17930 10.0kb upstream 10.0kb upstream 11182 true Chr3: 6142129-6153310 Arabidopsis thaliana
AT3G17930 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6143311-6153310 Arabidopsis thaliana
AT3G17930 10.0kb downstream 10.0kb downstream 11182 true Chr3: 6132129-6143310 Arabidopsis thaliana
AT3G17930 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6132129-6142128 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363420 5261 Brassicaceae View MSA
123838008 5264 Brassicales-Malvales View MSA
124341608 5266 SBM View MSA
124244686 5268 Malvidae View MSA
124060473 5270 Rosid View MSA
123747661 5271 Pentapetalae View MSA
122795403 5272 Eudicot View MSA
122047779 5273 Angiosperm View MSA
121344502 5274 Embryophyte View MSA
123428254 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 86.826     High  
cufflinks 11.58        
cufflinks 111.871     High High
cufflinks 11.953        
cufflinks 91.85     High  
cufflinks 8.778       Low

0 Strain