Gene : JAZ3 A. thaliana TAIR10
Primary Identifier:  ? AT3G17860 Defline:  (1 of 3) PTHR33077//PTHR33077:SF7 - FAMILY NOT NAMED // PROTEIN TIFY 6A-RELATED
Genomic Order:  1844 Name:  ? AT3G17860
Secondary Identifier:  ? PAC:19660849
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G17860 0.5kb upstream 0.5kb upstream 3753 true Chr3: 6119267-6123019 Arabidopsis thaliana
AT3G17860 0.5kb upstream 0.5kb upstream 500 false Chr3: 6119267-6119766 Arabidopsis thaliana
AT3G17860 0.5kb downstream 0.5kb downstream 3753 true Chr3: 6119767-6123519 Arabidopsis thaliana
AT3G17860 0.5kb downstream 0.5kb downstream 500 false Chr3: 6123020-6123519 Arabidopsis thaliana
AT3G17860 1.0kb upstream 1.0kb upstream 4253 true Chr3: 6118767-6123019 Arabidopsis thaliana
AT3G17860 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6118767-6119766 Arabidopsis thaliana
AT3G17860 1.0kb downstream 1.0kb downstream 4253 true Chr3: 6119767-6124019 Arabidopsis thaliana
AT3G17860 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6123020-6124019 Arabidopsis thaliana
AT3G17860 2.0kb upstream 2.0kb upstream 5253 true Chr3: 6117767-6123019 Arabidopsis thaliana
AT3G17860 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6117767-6119766 Arabidopsis thaliana
AT3G17860 2.0kb downstream 2.0kb downstream 5253 true Chr3: 6119767-6125019 Arabidopsis thaliana
AT3G17860 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6123020-6125019 Arabidopsis thaliana
AT3G17860 5.0kb upstream 5.0kb upstream 8253 true Chr3: 6114767-6123019 Arabidopsis thaliana
AT3G17860 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6114767-6119766 Arabidopsis thaliana
AT3G17860 5.0kb downstream 5.0kb downstream 8253 true Chr3: 6119767-6128019 Arabidopsis thaliana
AT3G17860 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6123020-6128019 Arabidopsis thaliana
AT3G17860 10.0kb upstream 10.0kb upstream 13253 true Chr3: 6109767-6123019 Arabidopsis thaliana
AT3G17860 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6109767-6119766 Arabidopsis thaliana
AT3G17860 10.0kb downstream 10.0kb downstream 13253 true Chr3: 6119767-6133019 Arabidopsis thaliana
AT3G17860 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6123020-6133019 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378594 5261 Brassicaceae View MSA
123832682 5264 Brassicales-Malvales View MSA
124348854 5266 SBM View MSA
124252891 5268 Malvidae View MSA
124069468 5270 Rosid View MSA
123746675 5271 Pentapetalae View MSA
122792842 5272 Eudicot View MSA
122042775 5273 Angiosperm View MSA
121351436 5274 Embryophyte View MSA
123382165 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.289       Low
cufflinks 20.807        
cufflinks 14.617        
cufflinks 18.372        
cufflinks 12.201        
cufflinks 14.325        

0 Strain