Gene : AT3G58650 A. thaliana TAIR10
Defline:  (1 of 4) PTHR21726:SF29 - F1O19.10 PROTEIN Genomic Order:  4920
Name:  ? AT3G58650 Secondary Identifier:  ? PAC:19660935
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G58650 0.5kb upstream 0.5kb upstream 4253 true Chr3: 21696246-21700498 Arabidopsis thaliana
AT3G58650 0.5kb upstream 0.5kb upstream 500 false Chr3: 21699999-21700498 Arabidopsis thaliana
AT3G58650 0.5kb downstream 0.5kb downstream 4253 true Chr3: 21695746-21699998 Arabidopsis thaliana
AT3G58650 0.5kb downstream 0.5kb downstream 500 false Chr3: 21695746-21696245 Arabidopsis thaliana
AT3G58650 1.0kb upstream 1.0kb upstream 4753 true Chr3: 21696246-21700998 Arabidopsis thaliana
AT3G58650 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21699999-21700998 Arabidopsis thaliana
AT3G58650 1.0kb downstream 1.0kb downstream 4753 true Chr3: 21695246-21699998 Arabidopsis thaliana
AT3G58650 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21695246-21696245 Arabidopsis thaliana
AT3G58650 2.0kb upstream 2.0kb upstream 5753 true Chr3: 21696246-21701998 Arabidopsis thaliana
AT3G58650 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21699999-21701998 Arabidopsis thaliana
AT3G58650 2.0kb downstream 2.0kb downstream 5753 true Chr3: 21694246-21699998 Arabidopsis thaliana
AT3G58650 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21694246-21696245 Arabidopsis thaliana
AT3G58650 5.0kb upstream 5.0kb upstream 8753 true Chr3: 21696246-21704998 Arabidopsis thaliana
AT3G58650 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21699999-21704998 Arabidopsis thaliana
AT3G58650 5.0kb downstream 5.0kb downstream 8753 true Chr3: 21691246-21699998 Arabidopsis thaliana
AT3G58650 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21691246-21696245 Arabidopsis thaliana
AT3G58650 10.0kb upstream 10.0kb upstream 13753 true Chr3: 21696246-21709998 Arabidopsis thaliana
AT3G58650 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21699999-21709998 Arabidopsis thaliana
AT3G58650 10.0kb downstream 10.0kb downstream 13753 true Chr3: 21686246-21699998 Arabidopsis thaliana
AT3G58650 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21686246-21696245 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365355 5261 Brassicaceae View MSA
123840499 5264 Brassicales-Malvales View MSA
124346619 5266 SBM View MSA
124253293 5268 Malvidae View MSA
124070110 5270 Rosid View MSA
123742080 5271 Pentapetalae View MSA
122793080 5272 Eudicot View MSA
122049576 5273 Angiosperm View MSA
121350217 5274 Embryophyte View MSA
123381628 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.445        
cufflinks 5.376        
cufflinks 1.062       Low
cufflinks 4.877        
cufflinks 0.931       Low
cufflinks 8.455       High

0 Strain