Gene : SCE1 A. thaliana TAIR10
Primary Identifier:  ? AT3G57870 Defline:  (1 of 1) K10577 - ubiquitin-conjugating enzyme E2 I (UBE2I, UBC9)
Genomic Order:  4841 Name:  ? AT3G57870
Secondary Identifier:  ? PAC:19664719
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7511 Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G57870 0.5kb upstream 0.5kb upstream 2205 true Chr3: 21428496-21430700 Arabidopsis thaliana
AT3G57870 0.5kb upstream 0.5kb upstream 500 false Chr3: 21430201-21430700 Arabidopsis thaliana
AT3G57870 0.5kb downstream 0.5kb downstream 2205 true Chr3: 21427996-21430200 Arabidopsis thaliana
AT3G57870 0.5kb downstream 0.5kb downstream 500 false Chr3: 21427996-21428495 Arabidopsis thaliana
AT3G57870 1.0kb upstream 1.0kb upstream 2705 true Chr3: 21428496-21431200 Arabidopsis thaliana
AT3G57870 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21430201-21431200 Arabidopsis thaliana
AT3G57870 1.0kb downstream 1.0kb downstream 2705 true Chr3: 21427496-21430200 Arabidopsis thaliana
AT3G57870 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21427496-21428495 Arabidopsis thaliana
AT3G57870 2.0kb upstream 2.0kb upstream 3705 true Chr3: 21428496-21432200 Arabidopsis thaliana
AT3G57870 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21430201-21432200 Arabidopsis thaliana
AT3G57870 2.0kb downstream 2.0kb downstream 3705 true Chr3: 21426496-21430200 Arabidopsis thaliana
AT3G57870 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21426496-21428495 Arabidopsis thaliana
AT3G57870 5.0kb upstream 5.0kb upstream 6705 true Chr3: 21428496-21435200 Arabidopsis thaliana
AT3G57870 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21430201-21435200 Arabidopsis thaliana
AT3G57870 5.0kb downstream 5.0kb downstream 6705 true Chr3: 21423496-21430200 Arabidopsis thaliana
AT3G57870 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21423496-21428495 Arabidopsis thaliana
AT3G57870 10.0kb upstream 10.0kb upstream 11705 true Chr3: 21428496-21440200 Arabidopsis thaliana
AT3G57870 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21430201-21440200 Arabidopsis thaliana
AT3G57870 10.0kb downstream 10.0kb downstream 11705 true Chr3: 21418496-21430200 Arabidopsis thaliana
AT3G57870 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21418496-21428495 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375381 5261 Brassicaceae View MSA
123839488 5264 Brassicales-Malvales View MSA
124344755 5266 SBM View MSA
124236998 5268 Malvidae View MSA
124074734 5270 Rosid View MSA
123752891 5271 Pentapetalae View MSA
122794655 5272 Eudicot View MSA
122047112 5273 Angiosperm View MSA
121344973 5274 Embryophyte View MSA
123425853 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.556     High  
cufflinks 94.662     High High
cufflinks 52.321     High  
cufflinks 76.625     High  
cufflinks 50.996     High Low
cufflinks 82.3     High  

0 Strain