Gene : NRPA1 A. thaliana TAIR10
Primary Identifier:  ? AT3G57660 Defline:  (1 of 1) K02999 - DNA-directed RNA polymerase I subunit RPA1 (RPA1, POLR1A)
Genomic Order:  4820 Name:  ? AT3G57660
Secondary Identifier:  ? PAC:19660190
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G57660 0.5kb upstream 0.5kb upstream 9569 true Chr3: 21353246-21362814 Arabidopsis thaliana
AT3G57660 0.5kb upstream 0.5kb upstream 500 false Chr3: 21353246-21353745 Arabidopsis thaliana
AT3G57660 0.5kb downstream 0.5kb downstream 9569 true Chr3: 21353746-21363314 Arabidopsis thaliana
AT3G57660 0.5kb downstream 0.5kb downstream 500 false Chr3: 21362815-21363314 Arabidopsis thaliana
AT3G57660 1.0kb upstream 1.0kb upstream 10069 true Chr3: 21352746-21362814 Arabidopsis thaliana
AT3G57660 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21352746-21353745 Arabidopsis thaliana
AT3G57660 1.0kb downstream 1.0kb downstream 10069 true Chr3: 21353746-21363814 Arabidopsis thaliana
AT3G57660 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21362815-21363814 Arabidopsis thaliana
AT3G57660 2.0kb upstream 2.0kb upstream 11069 true Chr3: 21351746-21362814 Arabidopsis thaliana
AT3G57660 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21351746-21353745 Arabidopsis thaliana
AT3G57660 2.0kb downstream 2.0kb downstream 11069 true Chr3: 21353746-21364814 Arabidopsis thaliana
AT3G57660 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21362815-21364814 Arabidopsis thaliana
AT3G57660 5.0kb upstream 5.0kb upstream 14069 true Chr3: 21348746-21362814 Arabidopsis thaliana
AT3G57660 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21348746-21353745 Arabidopsis thaliana
AT3G57660 5.0kb downstream 5.0kb downstream 14069 true Chr3: 21353746-21367814 Arabidopsis thaliana
AT3G57660 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21362815-21367814 Arabidopsis thaliana
AT3G57660 10.0kb upstream 10.0kb upstream 19069 true Chr3: 21343746-21362814 Arabidopsis thaliana
AT3G57660 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21343746-21353745 Arabidopsis thaliana
AT3G57660 10.0kb downstream 10.0kb downstream 19069 true Chr3: 21353746-21372814 Arabidopsis thaliana
AT3G57660 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21362815-21372814 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370304 5261 Brassicaceae View MSA
123832966 5264 Brassicales-Malvales View MSA
124340101 5266 SBM View MSA
124240607 5268 Malvidae View MSA
124068682 5270 Rosid View MSA
123740783 5271 Pentapetalae View MSA
122786544 5272 Eudicot View MSA
122045680 5273 Angiosperm View MSA
121344248 5274 Embryophyte View MSA
123424891 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.42        
cufflinks 8.32        
cufflinks 3.894       Low
cufflinks 8.344        
cufflinks 3.432       Low
cufflinks 9.508       High

0 Strain