Gene : NTT A. thaliana TAIR10
Primary Identifier:  ? AT3G57670 Defline:  (1 of 3) PTHR10593//PTHR10593:SF41 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED
Genomic Order:  4821 Name:  ? AT3G57670
Secondary Identifier:  ? PAC:19658877
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G57670 0.5kb upstream 0.5kb upstream 3044 true Chr3: 21370403-21373446 Arabidopsis thaliana
AT3G57670 0.5kb upstream 0.5kb upstream 500 false Chr3: 21370403-21370902 Arabidopsis thaliana
AT3G57670 0.5kb downstream 0.5kb downstream 3044 true Chr3: 21370903-21373946 Arabidopsis thaliana
AT3G57670 0.5kb downstream 0.5kb downstream 500 false Chr3: 21373447-21373946 Arabidopsis thaliana
AT3G57670 1.0kb upstream 1.0kb upstream 3544 true Chr3: 21369903-21373446 Arabidopsis thaliana
AT3G57670 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21369903-21370902 Arabidopsis thaliana
AT3G57670 1.0kb downstream 1.0kb downstream 3544 true Chr3: 21370903-21374446 Arabidopsis thaliana
AT3G57670 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21373447-21374446 Arabidopsis thaliana
AT3G57670 2.0kb upstream 2.0kb upstream 4544 true Chr3: 21368903-21373446 Arabidopsis thaliana
AT3G57670 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21368903-21370902 Arabidopsis thaliana
AT3G57670 2.0kb downstream 2.0kb downstream 4544 true Chr3: 21370903-21375446 Arabidopsis thaliana
AT3G57670 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21373447-21375446 Arabidopsis thaliana
AT3G57670 5.0kb upstream 5.0kb upstream 7544 true Chr3: 21365903-21373446 Arabidopsis thaliana
AT3G57670 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21365903-21370902 Arabidopsis thaliana
AT3G57670 5.0kb downstream 5.0kb downstream 7544 true Chr3: 21370903-21378446 Arabidopsis thaliana
AT3G57670 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21373447-21378446 Arabidopsis thaliana
AT3G57670 10.0kb upstream 10.0kb upstream 12544 true Chr3: 21360903-21373446 Arabidopsis thaliana
AT3G57670 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21360903-21370902 Arabidopsis thaliana
AT3G57670 10.0kb downstream 10.0kb downstream 12544 true Chr3: 21370903-21383446 Arabidopsis thaliana
AT3G57670 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21373447-21383446 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375321 5261 Brassicaceae View MSA
123834057 5264 Brassicales-Malvales View MSA
124338223 5266 SBM View MSA
124251030 5268 Malvidae View MSA
124071886 5270 Rosid View MSA
123745517 5271 Pentapetalae View MSA
122795224 5272 Eudicot View MSA
122047966 5273 Angiosperm View MSA
121348294 5274 Embryophyte View MSA
123428588 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.32        
cufflinks 6.232        
cufflinks 0.354        
cufflinks 5.371        
cufflinks 0.357        
cufflinks 4.85        

0 Strain