Gene : AT3G57540 A. thaliana TAIR10
Defline:  (1 of 17) PF03763 - Remorin, C-terminal region (Remorin_C) Genomic Order:  4808
Name:  ? AT3G57540 Secondary Identifier:  ? PAC:19659555
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G57540 0.5kb upstream 0.5kb upstream 2165 true Chr3: 21301397-21303561 Arabidopsis thaliana
AT3G57540 0.5kb upstream 0.5kb upstream 500 false Chr3: 21303062-21303561 Arabidopsis thaliana
AT3G57540 0.5kb downstream 0.5kb downstream 2165 true Chr3: 21300897-21303061 Arabidopsis thaliana
AT3G57540 0.5kb downstream 0.5kb downstream 500 false Chr3: 21300897-21301396 Arabidopsis thaliana
AT3G57540 1.0kb upstream 1.0kb upstream 2665 true Chr3: 21301397-21304061 Arabidopsis thaliana
AT3G57540 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21303062-21304061 Arabidopsis thaliana
AT3G57540 1.0kb downstream 1.0kb downstream 2665 true Chr3: 21300397-21303061 Arabidopsis thaliana
AT3G57540 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21300397-21301396 Arabidopsis thaliana
AT3G57540 2.0kb upstream 2.0kb upstream 3665 true Chr3: 21301397-21305061 Arabidopsis thaliana
AT3G57540 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21303062-21305061 Arabidopsis thaliana
AT3G57540 2.0kb downstream 2.0kb downstream 3665 true Chr3: 21299397-21303061 Arabidopsis thaliana
AT3G57540 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21299397-21301396 Arabidopsis thaliana
AT3G57540 5.0kb upstream 5.0kb upstream 6665 true Chr3: 21301397-21308061 Arabidopsis thaliana
AT3G57540 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21303062-21308061 Arabidopsis thaliana
AT3G57540 5.0kb downstream 5.0kb downstream 6665 true Chr3: 21296397-21303061 Arabidopsis thaliana
AT3G57540 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21296397-21301396 Arabidopsis thaliana
AT3G57540 10.0kb upstream 10.0kb upstream 11665 true Chr3: 21301397-21313061 Arabidopsis thaliana
AT3G57540 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21303062-21313061 Arabidopsis thaliana
AT3G57540 10.0kb downstream 10.0kb downstream 11665 true Chr3: 21291397-21303061 Arabidopsis thaliana
AT3G57540 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21291397-21301396 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369541 5261 Brassicaceae View MSA
123835962 5264 Brassicales-Malvales View MSA
124336535 5266 SBM View MSA
124247974 5268 Malvidae View MSA
124064015 5270 Rosid View MSA
123736918 5271 Pentapetalae View MSA
122790466 5272 Eudicot View MSA
122046569 5273 Angiosperm View MSA
121351512 5274 Embryophyte View MSA
123382200 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.992        
cufflinks 26.63        
cufflinks 2.054       Low
cufflinks 30.955     High High
cufflinks 3.17        
cufflinks 18.527        

0 Strain