Gene : NAGK A. thaliana TAIR10
Primary Identifier:  ? AT3G57560 Defline:  (1 of 1) 2.7.2.8 - Acetylglutamate kinase
Genomic Order:  4810 Name:  ? AT3G57560
Secondary Identifier:  ? PAC:19659346
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ARGSYNBSUB-PWY Arabidopsis thaliana pathologic  
Athaliana ARGSYN-PWY Arabidopsis thaliana pathologic  
Athaliana GLUTORN-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G57560 0.5kb upstream 0.5kb upstream 1988 true Chr3: 21310825-21312812 Arabidopsis thaliana
AT3G57560 0.5kb upstream 0.5kb upstream 500 false Chr3: 21312313-21312812 Arabidopsis thaliana
AT3G57560 0.5kb downstream 0.5kb downstream 1988 true Chr3: 21310325-21312312 Arabidopsis thaliana
AT3G57560 0.5kb downstream 0.5kb downstream 500 false Chr3: 21310325-21310824 Arabidopsis thaliana
AT3G57560 1.0kb upstream 1.0kb upstream 2488 true Chr3: 21310825-21313312 Arabidopsis thaliana
AT3G57560 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21312313-21313312 Arabidopsis thaliana
AT3G57560 1.0kb downstream 1.0kb downstream 2488 true Chr3: 21309825-21312312 Arabidopsis thaliana
AT3G57560 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21309825-21310824 Arabidopsis thaliana
AT3G57560 2.0kb upstream 2.0kb upstream 3488 true Chr3: 21310825-21314312 Arabidopsis thaliana
AT3G57560 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21312313-21314312 Arabidopsis thaliana
AT3G57560 2.0kb downstream 2.0kb downstream 3488 true Chr3: 21308825-21312312 Arabidopsis thaliana
AT3G57560 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21308825-21310824 Arabidopsis thaliana
AT3G57560 5.0kb upstream 5.0kb upstream 6488 true Chr3: 21310825-21317312 Arabidopsis thaliana
AT3G57560 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21312313-21317312 Arabidopsis thaliana
AT3G57560 5.0kb downstream 5.0kb downstream 6488 true Chr3: 21305825-21312312 Arabidopsis thaliana
AT3G57560 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21305825-21310824 Arabidopsis thaliana
AT3G57560 10.0kb upstream 10.0kb upstream 11488 true Chr3: 21310825-21322312 Arabidopsis thaliana
AT3G57560 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21312313-21322312 Arabidopsis thaliana
AT3G57560 10.0kb downstream 10.0kb downstream 11488 true Chr3: 21300825-21312312 Arabidopsis thaliana
AT3G57560 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21300825-21310824 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368103 5261 Brassicaceae View MSA
123834748 5264 Brassicales-Malvales View MSA
124350403 5266 SBM View MSA
124250749 5268 Malvidae View MSA
124062864 5270 Rosid View MSA
123739875 5271 Pentapetalae View MSA
122792416 5272 Eudicot View MSA
122045485 5273 Angiosperm View MSA
121347525 5274 Embryophyte View MSA
123424020 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.695       High
cufflinks 10.614       Low
cufflinks 17.228       High
cufflinks 11.858        
cufflinks 13.072        
cufflinks 14.227        

0 Strain