Gene : AT3G57280 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12668//PTHR12668:SF18 - TRANSMEMBRANE PROTEIN 14, 15 // SUBFAMILY NOT NAMED Genomic Order:  4782
Name:  ? AT3G57280 Secondary Identifier:  ? PAC:19664417
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G57280 0.5kb upstream 0.5kb upstream 2437 true Chr3: 21193280-21195716 Arabidopsis thaliana
AT3G57280 0.5kb upstream 0.5kb upstream 500 false Chr3: 21193280-21193779 Arabidopsis thaliana
AT3G57280 0.5kb downstream 0.5kb downstream 2437 true Chr3: 21193780-21196216 Arabidopsis thaliana
AT3G57280 0.5kb downstream 0.5kb downstream 500 false Chr3: 21195717-21196216 Arabidopsis thaliana
AT3G57280 1.0kb upstream 1.0kb upstream 2937 true Chr3: 21192780-21195716 Arabidopsis thaliana
AT3G57280 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21192780-21193779 Arabidopsis thaliana
AT3G57280 1.0kb downstream 1.0kb downstream 2937 true Chr3: 21193780-21196716 Arabidopsis thaliana
AT3G57280 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21195717-21196716 Arabidopsis thaliana
AT3G57280 2.0kb upstream 2.0kb upstream 3937 true Chr3: 21191780-21195716 Arabidopsis thaliana
AT3G57280 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21191780-21193779 Arabidopsis thaliana
AT3G57280 2.0kb downstream 2.0kb downstream 3937 true Chr3: 21193780-21197716 Arabidopsis thaliana
AT3G57280 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21195717-21197716 Arabidopsis thaliana
AT3G57280 5.0kb upstream 5.0kb upstream 6937 true Chr3: 21188780-21195716 Arabidopsis thaliana
AT3G57280 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21188780-21193779 Arabidopsis thaliana
AT3G57280 5.0kb downstream 5.0kb downstream 6937 true Chr3: 21193780-21200716 Arabidopsis thaliana
AT3G57280 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21195717-21200716 Arabidopsis thaliana
AT3G57280 10.0kb upstream 10.0kb upstream 11937 true Chr3: 21183780-21195716 Arabidopsis thaliana
AT3G57280 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21183780-21193779 Arabidopsis thaliana
AT3G57280 10.0kb downstream 10.0kb downstream 11937 true Chr3: 21193780-21205716 Arabidopsis thaliana
AT3G57280 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21195717-21205716 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374432 5261 Brassicaceae View MSA
123841532 5264 Brassicales-Malvales View MSA
124337539 5266 SBM View MSA
124238031 5268 Malvidae View MSA
124063072 5270 Rosid View MSA
123745819 5271 Pentapetalae View MSA
122785700 5272 Eudicot View MSA
122045627 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.285       High
cufflinks 19.449        
cufflinks 19.472        
cufflinks 20.674        
cufflinks 22.824        
cufflinks 21.393        

0 Strain