Gene : INO80 A. thaliana TAIR10
Primary Identifier:  ? AT3G57300 Defline:  (1 of 1) K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1)
Genomic Order:  4784 Name:  ? AT3G57300
Secondary Identifier:  ? PAC:19659598
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G57300 0.5kb upstream 0.5kb upstream 8898 true Chr3: 21198988-21207885 Arabidopsis thaliana
AT3G57300 0.5kb upstream 0.5kb upstream 500 false Chr3: 21198988-21199487 Arabidopsis thaliana
AT3G57300 0.5kb downstream 0.5kb downstream 8898 true Chr3: 21199488-21208385 Arabidopsis thaliana
AT3G57300 0.5kb downstream 0.5kb downstream 500 false Chr3: 21207886-21208385 Arabidopsis thaliana
AT3G57300 1.0kb upstream 1.0kb upstream 9398 true Chr3: 21198488-21207885 Arabidopsis thaliana
AT3G57300 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21198488-21199487 Arabidopsis thaliana
AT3G57300 1.0kb downstream 1.0kb downstream 9398 true Chr3: 21199488-21208885 Arabidopsis thaliana
AT3G57300 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21207886-21208885 Arabidopsis thaliana
AT3G57300 2.0kb upstream 2.0kb upstream 10398 true Chr3: 21197488-21207885 Arabidopsis thaliana
AT3G57300 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21197488-21199487 Arabidopsis thaliana
AT3G57300 2.0kb downstream 2.0kb downstream 10398 true Chr3: 21199488-21209885 Arabidopsis thaliana
AT3G57300 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21207886-21209885 Arabidopsis thaliana
AT3G57300 5.0kb upstream 5.0kb upstream 13398 true Chr3: 21194488-21207885 Arabidopsis thaliana
AT3G57300 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21194488-21199487 Arabidopsis thaliana
AT3G57300 5.0kb downstream 5.0kb downstream 13398 true Chr3: 21199488-21212885 Arabidopsis thaliana
AT3G57300 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21207886-21212885 Arabidopsis thaliana
AT3G57300 10.0kb upstream 10.0kb upstream 18398 true Chr3: 21189488-21207885 Arabidopsis thaliana
AT3G57300 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21189488-21199487 Arabidopsis thaliana
AT3G57300 10.0kb downstream 10.0kb downstream 18398 true Chr3: 21199488-21217885 Arabidopsis thaliana
AT3G57300 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21207886-21217885 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376709 5261 Brassicaceae View MSA
123833204 5264 Brassicales-Malvales View MSA
124344000 5266 SBM View MSA
124239950 5268 Malvidae View MSA
124060619 5270 Rosid View MSA
123749467 5271 Pentapetalae View MSA
122791050 5272 Eudicot View MSA
122043788 5273 Angiosperm View MSA
121344676 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.06        
cufflinks 10.505       High
cufflinks 5.364        
cufflinks 10.056       High
cufflinks 5.501        
cufflinks 7.06        

0 Strain