Gene : EIF3E A. thaliana TAIR10
Primary Identifier:  ? AT3G57290 Defline:  (1 of 1) K03250 - translation initiation factor 3 subunit E (EIF3E, INT6)
Genomic Order:  4783 Name:  ? AT3G57290
Secondary Identifier:  ? PAC:19663858
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Expression

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6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G57290 0.5kb upstream 0.5kb upstream 3134 true Chr3: 21196550-21199683 Arabidopsis thaliana
AT3G57290 0.5kb upstream 0.5kb upstream 500 false Chr3: 21199184-21199683 Arabidopsis thaliana
AT3G57290 0.5kb downstream 0.5kb downstream 3134 true Chr3: 21196050-21199183 Arabidopsis thaliana
AT3G57290 0.5kb downstream 0.5kb downstream 500 false Chr3: 21196050-21196549 Arabidopsis thaliana
AT3G57290 1.0kb upstream 1.0kb upstream 3634 true Chr3: 21196550-21200183 Arabidopsis thaliana
AT3G57290 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21199184-21200183 Arabidopsis thaliana
AT3G57290 1.0kb downstream 1.0kb downstream 3634 true Chr3: 21195550-21199183 Arabidopsis thaliana
AT3G57290 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21195550-21196549 Arabidopsis thaliana
AT3G57290 2.0kb upstream 2.0kb upstream 4634 true Chr3: 21196550-21201183 Arabidopsis thaliana
AT3G57290 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21199184-21201183 Arabidopsis thaliana
AT3G57290 2.0kb downstream 2.0kb downstream 4634 true Chr3: 21194550-21199183 Arabidopsis thaliana
AT3G57290 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21194550-21196549 Arabidopsis thaliana
AT3G57290 5.0kb upstream 5.0kb upstream 7634 true Chr3: 21196550-21204183 Arabidopsis thaliana
AT3G57290 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21199184-21204183 Arabidopsis thaliana
AT3G57290 5.0kb downstream 5.0kb downstream 7634 true Chr3: 21191550-21199183 Arabidopsis thaliana
AT3G57290 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21191550-21196549 Arabidopsis thaliana
AT3G57290 10.0kb upstream 10.0kb upstream 12634 true Chr3: 21196550-21209183 Arabidopsis thaliana
AT3G57290 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21199184-21209183 Arabidopsis thaliana
AT3G57290 10.0kb downstream 10.0kb downstream 12634 true Chr3: 21186550-21199183 Arabidopsis thaliana
AT3G57290 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21186550-21196549 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378802 5261 Brassicaceae View MSA
123830961 5264 Brassicales-Malvales View MSA
124340380 5266 SBM View MSA
124240867 5268 Malvidae View MSA
124067945 5270 Rosid View MSA
123749656 5271 Pentapetalae View MSA
122787215 5272 Eudicot View MSA
122046060 5273 Angiosperm View MSA
121347595 5274 Embryophyte View MSA
123424359 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.22     High  
cufflinks 68.106     High High
cufflinks 41.404     High  
cufflinks 66.593     High  
cufflinks 37.683     High Low
cufflinks 63.489     High  

0 Strain