Gene : AT3G57350 A. thaliana TAIR10
Defline:  (1 of 2) K14309 - nuclear pore complex protein Nup93 (NUP93, NIC96) Genomic Order:  4789
Name:  ? AT3G57350 Secondary Identifier:  ? PAC:19662078
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G57350 0.5kb upstream 0.5kb upstream 5419 true Chr3: 21220387-21225805 Arabidopsis thaliana
AT3G57350 0.5kb upstream 0.5kb upstream 500 false Chr3: 21225306-21225805 Arabidopsis thaliana
AT3G57350 0.5kb downstream 0.5kb downstream 5419 true Chr3: 21219887-21225305 Arabidopsis thaliana
AT3G57350 0.5kb downstream 0.5kb downstream 500 false Chr3: 21219887-21220386 Arabidopsis thaliana
AT3G57350 1.0kb upstream 1.0kb upstream 5919 true Chr3: 21220387-21226305 Arabidopsis thaliana
AT3G57350 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21225306-21226305 Arabidopsis thaliana
AT3G57350 1.0kb downstream 1.0kb downstream 5919 true Chr3: 21219387-21225305 Arabidopsis thaliana
AT3G57350 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21219387-21220386 Arabidopsis thaliana
AT3G57350 2.0kb upstream 2.0kb upstream 6919 true Chr3: 21220387-21227305 Arabidopsis thaliana
AT3G57350 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21225306-21227305 Arabidopsis thaliana
AT3G57350 2.0kb downstream 2.0kb downstream 6919 true Chr3: 21218387-21225305 Arabidopsis thaliana
AT3G57350 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21218387-21220386 Arabidopsis thaliana
AT3G57350 5.0kb upstream 5.0kb upstream 9919 true Chr3: 21220387-21230305 Arabidopsis thaliana
AT3G57350 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21225306-21230305 Arabidopsis thaliana
AT3G57350 5.0kb downstream 5.0kb downstream 9919 true Chr3: 21215387-21225305 Arabidopsis thaliana
AT3G57350 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21215387-21220386 Arabidopsis thaliana
AT3G57350 10.0kb upstream 10.0kb upstream 14919 true Chr3: 21220387-21235305 Arabidopsis thaliana
AT3G57350 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21225306-21235305 Arabidopsis thaliana
AT3G57350 10.0kb downstream 10.0kb downstream 14919 true Chr3: 21210387-21225305 Arabidopsis thaliana
AT3G57350 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21210387-21220386 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373626 5261 Brassicaceae View MSA
123800589 5264 Brassicales-Malvales View MSA
124297989 5266 SBM View MSA
124149742 5268 Malvidae View MSA
124073595 5270 Rosid View MSA
123740371 5271 Pentapetalae View MSA
122788822 5272 Eudicot View MSA
122043795 5273 Angiosperm View MSA
121346539 5274 Embryophyte View MSA
123424897 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.674        
cufflinks 7.293        
cufflinks 3.591        
cufflinks 7.867       High
cufflinks 3.296       Low
cufflinks 6.47        

0 Strain