Gene : AT3G57060 A. thaliana TAIR10
Defline:  (1 of 1) K06677 - condensin complex subunit 1 (YCS4, CNAP1, CAPD2) Genomic Order:  4758
Name:  ? AT3G57060 Secondary Identifier:  ? PAC:19662717
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G57060 0.5kb upstream 0.5kb upstream 6816 true Chr3: 21114798-21121613 Arabidopsis thaliana
AT3G57060 0.5kb upstream 0.5kb upstream 500 false Chr3: 21121114-21121613 Arabidopsis thaliana
AT3G57060 0.5kb downstream 0.5kb downstream 6816 true Chr3: 21114298-21121113 Arabidopsis thaliana
AT3G57060 0.5kb downstream 0.5kb downstream 500 false Chr3: 21114298-21114797 Arabidopsis thaliana
AT3G57060 1.0kb upstream 1.0kb upstream 7316 true Chr3: 21114798-21122113 Arabidopsis thaliana
AT3G57060 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21121114-21122113 Arabidopsis thaliana
AT3G57060 1.0kb downstream 1.0kb downstream 7316 true Chr3: 21113798-21121113 Arabidopsis thaliana
AT3G57060 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21113798-21114797 Arabidopsis thaliana
AT3G57060 2.0kb upstream 2.0kb upstream 8316 true Chr3: 21114798-21123113 Arabidopsis thaliana
AT3G57060 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21121114-21123113 Arabidopsis thaliana
AT3G57060 2.0kb downstream 2.0kb downstream 8316 true Chr3: 21112798-21121113 Arabidopsis thaliana
AT3G57060 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21112798-21114797 Arabidopsis thaliana
AT3G57060 5.0kb upstream 5.0kb upstream 11316 true Chr3: 21114798-21126113 Arabidopsis thaliana
AT3G57060 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21121114-21126113 Arabidopsis thaliana
AT3G57060 5.0kb downstream 5.0kb downstream 11316 true Chr3: 21109798-21121113 Arabidopsis thaliana
AT3G57060 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21109798-21114797 Arabidopsis thaliana
AT3G57060 10.0kb upstream 10.0kb upstream 16316 true Chr3: 21114798-21131113 Arabidopsis thaliana
AT3G57060 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21121114-21131113 Arabidopsis thaliana
AT3G57060 10.0kb downstream 10.0kb downstream 16316 true Chr3: 21104798-21121113 Arabidopsis thaliana
AT3G57060 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21104798-21114797 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362767 5261 Brassicaceae View MSA
123834340 5264 Brassicales-Malvales View MSA
124342971 5266 SBM View MSA
124241005 5268 Malvidae View MSA
124061562 5270 Rosid View MSA
123737638 5271 Pentapetalae View MSA
122792109 5272 Eudicot View MSA
122042219 5273 Angiosperm View MSA
121346287 5274 Embryophyte View MSA
123424305 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.075        
cufflinks 2.501        
cufflinks 0.949        
cufflinks 2.495        
cufflinks 0.827       Low
cufflinks 3.119       High

0 Strain