Gene : BOP1 A. thaliana TAIR10
Primary Identifier:  ? AT3G57130 Defline:  (1 of 6) K14508 - regulatory protein NPR1 (NPR1)
Genomic Order:  4767 Name:  ? AT3G57130
Secondary Identifier:  ? PAC:19660520
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G57130 0.5kb upstream 0.5kb upstream 2970 true Chr3: 21147058-21150027 Arabidopsis thaliana
AT3G57130 0.5kb upstream 0.5kb upstream 500 false Chr3: 21147058-21147557 Arabidopsis thaliana
AT3G57130 0.5kb downstream 0.5kb downstream 2970 true Chr3: 21147558-21150527 Arabidopsis thaliana
AT3G57130 0.5kb downstream 0.5kb downstream 500 false Chr3: 21150028-21150527 Arabidopsis thaliana
AT3G57130 1.0kb upstream 1.0kb upstream 3470 true Chr3: 21146558-21150027 Arabidopsis thaliana
AT3G57130 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21146558-21147557 Arabidopsis thaliana
AT3G57130 1.0kb downstream 1.0kb downstream 3470 true Chr3: 21147558-21151027 Arabidopsis thaliana
AT3G57130 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21150028-21151027 Arabidopsis thaliana
AT3G57130 2.0kb upstream 2.0kb upstream 4470 true Chr3: 21145558-21150027 Arabidopsis thaliana
AT3G57130 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21145558-21147557 Arabidopsis thaliana
AT3G57130 2.0kb downstream 2.0kb downstream 4470 true Chr3: 21147558-21152027 Arabidopsis thaliana
AT3G57130 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21150028-21152027 Arabidopsis thaliana
AT3G57130 5.0kb upstream 5.0kb upstream 7470 true Chr3: 21142558-21150027 Arabidopsis thaliana
AT3G57130 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21142558-21147557 Arabidopsis thaliana
AT3G57130 5.0kb downstream 5.0kb downstream 7470 true Chr3: 21147558-21155027 Arabidopsis thaliana
AT3G57130 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21150028-21155027 Arabidopsis thaliana
AT3G57130 10.0kb upstream 10.0kb upstream 12470 true Chr3: 21137558-21150027 Arabidopsis thaliana
AT3G57130 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21137558-21147557 Arabidopsis thaliana
AT3G57130 10.0kb downstream 10.0kb downstream 12470 true Chr3: 21147558-21160027 Arabidopsis thaliana
AT3G57130 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21150028-21160027 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511001 5273 Angiosperm View MSA
122370936 5261 Brassicaceae View MSA
123800071 5264 Brassicales-Malvales View MSA
124297525 5266 SBM View MSA
124149387 5268 Malvidae View MSA
123875204 5270 Rosid View MSA
123459068 5271 Pentapetalae View MSA
122494463 5272 Eudicot View MSA
121349965 5274 Embryophyte View MSA
123381520 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.13     Low  
cufflinks 0.271     Low  
cufflinks 0.062     Low Low
cufflinks 0.169     Low  
cufflinks 0.074     Low  
cufflinks 0.713       High

0 Strain