Gene : AT3G56420 A. thaliana TAIR10
Defline:  (1 of 2) PTHR10438//PTHR10438:SF267 - THIOREDOXIN // THIOREDOXIN-LIKE PROTEIN CXXS2-RELATED Genomic Order:  4693
Name:  ? AT3G56420 Secondary Identifier:  ? PAC:19664926
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G56420 0.5kb upstream 0.5kb upstream 1595 true Chr3: 20922140-20923734 Arabidopsis thaliana
AT3G56420 0.5kb upstream 0.5kb upstream 500 false Chr3: 20923235-20923734 Arabidopsis thaliana
AT3G56420 0.5kb downstream 0.5kb downstream 1595 true Chr3: 20921640-20923234 Arabidopsis thaliana
AT3G56420 0.5kb downstream 0.5kb downstream 500 false Chr3: 20921640-20922139 Arabidopsis thaliana
AT3G56420 1.0kb upstream 1.0kb upstream 2095 true Chr3: 20922140-20924234 Arabidopsis thaliana
AT3G56420 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20923235-20924234 Arabidopsis thaliana
AT3G56420 1.0kb downstream 1.0kb downstream 2095 true Chr3: 20921140-20923234 Arabidopsis thaliana
AT3G56420 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20921140-20922139 Arabidopsis thaliana
AT3G56420 2.0kb upstream 2.0kb upstream 3095 true Chr3: 20922140-20925234 Arabidopsis thaliana
AT3G56420 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20923235-20925234 Arabidopsis thaliana
AT3G56420 2.0kb downstream 2.0kb downstream 3095 true Chr3: 20920140-20923234 Arabidopsis thaliana
AT3G56420 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20920140-20922139 Arabidopsis thaliana
AT3G56420 5.0kb upstream 5.0kb upstream 6095 true Chr3: 20922140-20928234 Arabidopsis thaliana
AT3G56420 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20923235-20928234 Arabidopsis thaliana
AT3G56420 5.0kb downstream 5.0kb downstream 6095 true Chr3: 20917140-20923234 Arabidopsis thaliana
AT3G56420 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20917140-20922139 Arabidopsis thaliana
AT3G56420 10.0kb upstream 10.0kb upstream 11095 true Chr3: 20922140-20933234 Arabidopsis thaliana
AT3G56420 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20923235-20933234 Arabidopsis thaliana
AT3G56420 10.0kb downstream 10.0kb downstream 11095 true Chr3: 20912140-20923234 Arabidopsis thaliana
AT3G56420 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20912140-20922139 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780671 5273 Angiosperm View MSA
122378955 5261 Brassicaceae View MSA
123802049 5264 Brassicales-Malvales View MSA
124299273 5266 SBM View MSA
124150732 5268 Malvidae View MSA
123876296 5270 Rosid View MSA
123747451 5271 Pentapetalae View MSA
122772179 5272 Eudicot View MSA
121350702 5274 Embryophyte View MSA
123427895 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.013     Low Low
cufflinks 0.041     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain