Gene : AT3G56350 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11404//PTHR11404:SF6 - SUPEROXIDE DISMUTASE 2 // SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL Genomic Order:  4686
Name:  ? AT3G56350 Secondary Identifier:  ? PAC:19663302
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana DETOX1-PWY Arabidopsis thaliana pathologic  
Athaliana DETOX1-PWY-1 Arabidopsis thaliana pathologic  
Athaliana PWY-6854 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G56350 0.5kb upstream 0.5kb upstream 2180 true Chr3: 20893946-20896125 Arabidopsis thaliana
AT3G56350 0.5kb upstream 0.5kb upstream 500 false Chr3: 20895626-20896125 Arabidopsis thaliana
AT3G56350 0.5kb downstream 0.5kb downstream 2180 true Chr3: 20893446-20895625 Arabidopsis thaliana
AT3G56350 0.5kb downstream 0.5kb downstream 500 false Chr3: 20893446-20893945 Arabidopsis thaliana
AT3G56350 1.0kb upstream 1.0kb upstream 2680 true Chr3: 20893946-20896625 Arabidopsis thaliana
AT3G56350 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20895626-20896625 Arabidopsis thaliana
AT3G56350 1.0kb downstream 1.0kb downstream 2680 true Chr3: 20892946-20895625 Arabidopsis thaliana
AT3G56350 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20892946-20893945 Arabidopsis thaliana
AT3G56350 2.0kb upstream 2.0kb upstream 3680 true Chr3: 20893946-20897625 Arabidopsis thaliana
AT3G56350 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20895626-20897625 Arabidopsis thaliana
AT3G56350 2.0kb downstream 2.0kb downstream 3680 true Chr3: 20891946-20895625 Arabidopsis thaliana
AT3G56350 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20891946-20893945 Arabidopsis thaliana
AT3G56350 5.0kb upstream 5.0kb upstream 6680 true Chr3: 20893946-20900625 Arabidopsis thaliana
AT3G56350 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20895626-20900625 Arabidopsis thaliana
AT3G56350 5.0kb downstream 5.0kb downstream 6680 true Chr3: 20888946-20895625 Arabidopsis thaliana
AT3G56350 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20888946-20893945 Arabidopsis thaliana
AT3G56350 10.0kb upstream 10.0kb upstream 11680 true Chr3: 20893946-20905625 Arabidopsis thaliana
AT3G56350 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20895626-20905625 Arabidopsis thaliana
AT3G56350 10.0kb downstream 10.0kb downstream 11680 true Chr3: 20883946-20895625 Arabidopsis thaliana
AT3G56350 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20883946-20893945 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510302 5273 Angiosperm View MSA
122361724 5261 Brassicaceae View MSA
123798231 5264 Brassicales-Malvales View MSA
124295900 5266 SBM View MSA
124148209 5268 Malvidae View MSA
123874253 5270 Rosid View MSA
123458256 5271 Pentapetalae View MSA
122493663 5272 Eudicot View MSA
120783407 5274 Embryophyte View MSA
122825421 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.063     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.174     Low High
cufflinks 0.007     Low Low
cufflinks 0.029     Low  

0 Strain