Gene : AT3G56410 A. thaliana TAIR10
Defline:  (1 of 6) PF11331 - Probable zinc-ribbon domain (zinc_ribbon_12) Genomic Order:  4692
Name:  ? AT3G56410 Secondary Identifier:  ? PAC:19659349
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G56410 0.5kb upstream 0.5kb upstream 5667 true Chr3: 20916172-20921838 Arabidopsis thaliana
AT3G56410 0.5kb upstream 0.5kb upstream 500 false Chr3: 20921339-20921838 Arabidopsis thaliana
AT3G56410 0.5kb downstream 0.5kb downstream 5667 true Chr3: 20915672-20921338 Arabidopsis thaliana
AT3G56410 0.5kb downstream 0.5kb downstream 500 false Chr3: 20915672-20916171 Arabidopsis thaliana
AT3G56410 1.0kb upstream 1.0kb upstream 6167 true Chr3: 20916172-20922338 Arabidopsis thaliana
AT3G56410 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20921339-20922338 Arabidopsis thaliana
AT3G56410 1.0kb downstream 1.0kb downstream 6167 true Chr3: 20915172-20921338 Arabidopsis thaliana
AT3G56410 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20915172-20916171 Arabidopsis thaliana
AT3G56410 2.0kb upstream 2.0kb upstream 7167 true Chr3: 20916172-20923338 Arabidopsis thaliana
AT3G56410 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20921339-20923338 Arabidopsis thaliana
AT3G56410 2.0kb downstream 2.0kb downstream 7167 true Chr3: 20914172-20921338 Arabidopsis thaliana
AT3G56410 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20914172-20916171 Arabidopsis thaliana
AT3G56410 5.0kb upstream 5.0kb upstream 10167 true Chr3: 20916172-20926338 Arabidopsis thaliana
AT3G56410 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20921339-20926338 Arabidopsis thaliana
AT3G56410 5.0kb downstream 5.0kb downstream 10167 true Chr3: 20911172-20921338 Arabidopsis thaliana
AT3G56410 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20911172-20916171 Arabidopsis thaliana
AT3G56410 10.0kb upstream 10.0kb upstream 15167 true Chr3: 20916172-20931338 Arabidopsis thaliana
AT3G56410 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20921339-20931338 Arabidopsis thaliana
AT3G56410 10.0kb downstream 10.0kb downstream 15167 true Chr3: 20906172-20921338 Arabidopsis thaliana
AT3G56410 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20906172-20916171 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511240 5273 Angiosperm View MSA
122374187 5261 Brassicaceae View MSA
123800700 5264 Brassicales-Malvales View MSA
124298080 5266 SBM View MSA
124149815 5268 Malvidae View MSA
123875548 5270 Rosid View MSA
123459349 5271 Pentapetalae View MSA
122494740 5272 Eudicot View MSA
120784297 5274 Embryophyte View MSA
122826225 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.763       High
cufflinks 3.414        
cufflinks 5.137        
cufflinks 3.297        
cufflinks 5.354        
cufflinks 2.638       Low

0 Strain