Gene : RR17 A. thaliana TAIR10
Primary Identifier:  ? AT3G56380 Defline:  (1 of 2) PTHR26402//PTHR26402:SF521 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM // TWO-COMPONENT RESPONSE REGULATOR ARR16-RELATED
Genomic Order:  4689 Name:  ? AT3G56380
Secondary Identifier:  ? PAC:19664201
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G56380 0.5kb upstream 0.5kb upstream 1389 true Chr3: 20904980-20906368 Arabidopsis thaliana
AT3G56380 0.5kb upstream 0.5kb upstream 500 false Chr3: 20904980-20905479 Arabidopsis thaliana
AT3G56380 0.5kb downstream 0.5kb downstream 1389 true Chr3: 20905480-20906868 Arabidopsis thaliana
AT3G56380 0.5kb downstream 0.5kb downstream 500 false Chr3: 20906369-20906868 Arabidopsis thaliana
AT3G56380 1.0kb upstream 1.0kb upstream 1889 true Chr3: 20904480-20906368 Arabidopsis thaliana
AT3G56380 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20904480-20905479 Arabidopsis thaliana
AT3G56380 1.0kb downstream 1.0kb downstream 1889 true Chr3: 20905480-20907368 Arabidopsis thaliana
AT3G56380 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20906369-20907368 Arabidopsis thaliana
AT3G56380 2.0kb upstream 2.0kb upstream 2889 true Chr3: 20903480-20906368 Arabidopsis thaliana
AT3G56380 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20903480-20905479 Arabidopsis thaliana
AT3G56380 2.0kb downstream 2.0kb downstream 2889 true Chr3: 20905480-20908368 Arabidopsis thaliana
AT3G56380 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20906369-20908368 Arabidopsis thaliana
AT3G56380 5.0kb upstream 5.0kb upstream 5889 true Chr3: 20900480-20906368 Arabidopsis thaliana
AT3G56380 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20900480-20905479 Arabidopsis thaliana
AT3G56380 5.0kb downstream 5.0kb downstream 5889 true Chr3: 20905480-20911368 Arabidopsis thaliana
AT3G56380 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20906369-20911368 Arabidopsis thaliana
AT3G56380 10.0kb upstream 10.0kb upstream 10889 true Chr3: 20895480-20906368 Arabidopsis thaliana
AT3G56380 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20895480-20905479 Arabidopsis thaliana
AT3G56380 10.0kb downstream 10.0kb downstream 10889 true Chr3: 20905480-20916368 Arabidopsis thaliana
AT3G56380 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20906369-20916368 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377209 5261 Brassicaceae View MSA
123839154 5264 Brassicales-Malvales View MSA
124339072 5266 SBM View MSA
124249689 5268 Malvidae View MSA
124062080 5270 Rosid View MSA
123748366 5271 Pentapetalae View MSA
122792334 5272 Eudicot View MSA
122050729 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349796 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.063     Low  
cufflinks 0.29     Low  
cufflinks 0.04     Low  
cufflinks 0.577        
cufflinks 0.018     Low Low
cufflinks 0.686       High

0 Strain