Gene : AT3G56260 A. thaliana TAIR10
Genomic Order:  4678 Name:  ? AT3G56260
Secondary Identifier:  ? PAC:19663025
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G56260 0.5kb upstream 0.5kb upstream 1555 true Chr3: 20867970-20869524 Arabidopsis thaliana
AT3G56260 0.5kb upstream 0.5kb upstream 500 false Chr3: 20869025-20869524 Arabidopsis thaliana
AT3G56260 0.5kb downstream 0.5kb downstream 1555 true Chr3: 20867470-20869024 Arabidopsis thaliana
AT3G56260 0.5kb downstream 0.5kb downstream 500 false Chr3: 20867470-20867969 Arabidopsis thaliana
AT3G56260 1.0kb upstream 1.0kb upstream 2055 true Chr3: 20867970-20870024 Arabidopsis thaliana
AT3G56260 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20869025-20870024 Arabidopsis thaliana
AT3G56260 1.0kb downstream 1.0kb downstream 2055 true Chr3: 20866970-20869024 Arabidopsis thaliana
AT3G56260 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20866970-20867969 Arabidopsis thaliana
AT3G56260 2.0kb upstream 2.0kb upstream 3055 true Chr3: 20867970-20871024 Arabidopsis thaliana
AT3G56260 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20869025-20871024 Arabidopsis thaliana
AT3G56260 2.0kb downstream 2.0kb downstream 3055 true Chr3: 20865970-20869024 Arabidopsis thaliana
AT3G56260 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20865970-20867969 Arabidopsis thaliana
AT3G56260 5.0kb upstream 5.0kb upstream 6055 true Chr3: 20867970-20874024 Arabidopsis thaliana
AT3G56260 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20869025-20874024 Arabidopsis thaliana
AT3G56260 5.0kb downstream 5.0kb downstream 6055 true Chr3: 20862970-20869024 Arabidopsis thaliana
AT3G56260 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20862970-20867969 Arabidopsis thaliana
AT3G56260 10.0kb upstream 10.0kb upstream 11055 true Chr3: 20867970-20879024 Arabidopsis thaliana
AT3G56260 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20869025-20879024 Arabidopsis thaliana
AT3G56260 10.0kb downstream 10.0kb downstream 11055 true Chr3: 20857970-20869024 Arabidopsis thaliana
AT3G56260 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20857970-20867969 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369856 5261 Brassicaceae View MSA
123799857 5264 Brassicales-Malvales View MSA
124297338 5266 SBM View MSA
124149260 5268 Malvidae View MSA
124037552 5270 Rosid View MSA
123743182 5271 Pentapetalae View MSA
122790998 5272 Eudicot View MSA
122050526 5273 Angiosperm View MSA
121311968 5274 Embryophyte View MSA
123349191 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.965        
cufflinks 0.05     Low Low
cufflinks 0.948        
cufflinks 0.092     Low  
cufflinks 1.11        
cufflinks 0.054     Low Low

0 Strain