Gene : AT3G56290 A. thaliana TAIR10
Genomic Order:  4680 Name:  ? AT3G56290
Secondary Identifier:  ? PAC:19660842
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G56290 0.5kb upstream 0.5kb upstream 1530 true Chr3: 20878539-20880068 Arabidopsis thaliana
AT3G56290 0.5kb upstream 0.5kb upstream 500 false Chr3: 20879569-20880068 Arabidopsis thaliana
AT3G56290 0.5kb downstream 0.5kb downstream 1530 true Chr3: 20878039-20879568 Arabidopsis thaliana
AT3G56290 0.5kb downstream 0.5kb downstream 500 false Chr3: 20878039-20878538 Arabidopsis thaliana
AT3G56290 1.0kb upstream 1.0kb upstream 2030 true Chr3: 20878539-20880568 Arabidopsis thaliana
AT3G56290 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20879569-20880568 Arabidopsis thaliana
AT3G56290 1.0kb downstream 1.0kb downstream 2030 true Chr3: 20877539-20879568 Arabidopsis thaliana
AT3G56290 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20877539-20878538 Arabidopsis thaliana
AT3G56290 2.0kb upstream 2.0kb upstream 3030 true Chr3: 20878539-20881568 Arabidopsis thaliana
AT3G56290 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20879569-20881568 Arabidopsis thaliana
AT3G56290 2.0kb downstream 2.0kb downstream 3030 true Chr3: 20876539-20879568 Arabidopsis thaliana
AT3G56290 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20876539-20878538 Arabidopsis thaliana
AT3G56290 5.0kb upstream 5.0kb upstream 6030 true Chr3: 20878539-20884568 Arabidopsis thaliana
AT3G56290 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20879569-20884568 Arabidopsis thaliana
AT3G56290 5.0kb downstream 5.0kb downstream 6030 true Chr3: 20873539-20879568 Arabidopsis thaliana
AT3G56290 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20873539-20878538 Arabidopsis thaliana
AT3G56290 10.0kb upstream 10.0kb upstream 11030 true Chr3: 20878539-20889568 Arabidopsis thaliana
AT3G56290 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20879569-20889568 Arabidopsis thaliana
AT3G56290 10.0kb downstream 10.0kb downstream 11030 true Chr3: 20868539-20879568 Arabidopsis thaliana
AT3G56290 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20868539-20878538 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368761 5261 Brassicaceae View MSA
123840265 5264 Brassicales-Malvales View MSA
124339925 5266 SBM View MSA
124238092 5268 Malvidae View MSA
124064334 5270 Rosid View MSA
123739882 5271 Pentapetalae View MSA
122793420 5272 Eudicot View MSA
122047977 5273 Angiosperm View MSA
121345112 5274 Embryophyte View MSA
123425556 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.227        
cufflinks 0.103     Low  
cufflinks 10.353        
cufflinks 0.126     Low  
cufflinks 12.488        
cufflinks 0.017     Low Low

0 Strain