Gene : AT3G55770 A. thaliana TAIR10
Defline:  (1 of 3) K09377 - cysteine and glycine-rich protein (CSRP) Genomic Order:  4629
Name:  ? AT3G55770 Secondary Identifier:  ? PAC:19661944
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G55770 0.5kb upstream 0.5kb upstream 2599 true Chr3: 20702722-20705320 Arabidopsis thaliana
AT3G55770 0.5kb upstream 0.5kb upstream 500 false Chr3: 20702722-20703221 Arabidopsis thaliana
AT3G55770 0.5kb downstream 0.5kb downstream 2599 true Chr3: 20703222-20705820 Arabidopsis thaliana
AT3G55770 0.5kb downstream 0.5kb downstream 500 false Chr3: 20705321-20705820 Arabidopsis thaliana
AT3G55770 1.0kb upstream 1.0kb upstream 3099 true Chr3: 20702222-20705320 Arabidopsis thaliana
AT3G55770 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20702222-20703221 Arabidopsis thaliana
AT3G55770 1.0kb downstream 1.0kb downstream 3099 true Chr3: 20703222-20706320 Arabidopsis thaliana
AT3G55770 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20705321-20706320 Arabidopsis thaliana
AT3G55770 2.0kb upstream 2.0kb upstream 4099 true Chr3: 20701222-20705320 Arabidopsis thaliana
AT3G55770 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20701222-20703221 Arabidopsis thaliana
AT3G55770 2.0kb downstream 2.0kb downstream 4099 true Chr3: 20703222-20707320 Arabidopsis thaliana
AT3G55770 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20705321-20707320 Arabidopsis thaliana
AT3G55770 5.0kb upstream 5.0kb upstream 7099 true Chr3: 20698222-20705320 Arabidopsis thaliana
AT3G55770 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20698222-20703221 Arabidopsis thaliana
AT3G55770 5.0kb downstream 5.0kb downstream 7099 true Chr3: 20703222-20710320 Arabidopsis thaliana
AT3G55770 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20705321-20710320 Arabidopsis thaliana
AT3G55770 10.0kb upstream 10.0kb upstream 12099 true Chr3: 20693222-20705320 Arabidopsis thaliana
AT3G55770 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20693222-20703221 Arabidopsis thaliana
AT3G55770 10.0kb downstream 10.0kb downstream 12099 true Chr3: 20703222-20715320 Arabidopsis thaliana
AT3G55770 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20705321-20715320 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374055 5261 Brassicaceae View MSA
123836674 5264 Brassicales-Malvales View MSA
124350047 5266 SBM View MSA
124247965 5268 Malvidae View MSA
124066533 5270 Rosid View MSA
123751288 5271 Pentapetalae View MSA
122792830 5272 Eudicot View MSA
122045470 5273 Angiosperm View MSA
121348284 5274 Embryophyte View MSA
123426269 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.626       Low
cufflinks 18.831       High
cufflinks 8.527        
cufflinks 16.559        
cufflinks 9.205        
cufflinks 14.949        

0 Strain