Gene : AT3G55700 A. thaliana TAIR10
Defline:  (1 of 4) PTHR11926:SF204 - UDP-GLYCOSYLTRANSFERASE 76C1-RELATED Genomic Order:  4622
Name:  ? AT3G55700 Secondary Identifier:  ? PAC:19660357
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G55700 0.5kb upstream 0.5kb upstream 2758 true Chr3: 20670615-20673372 Arabidopsis thaliana
AT3G55700 0.5kb upstream 0.5kb upstream 500 false Chr3: 20670615-20671114 Arabidopsis thaliana
AT3G55700 0.5kb downstream 0.5kb downstream 2758 true Chr3: 20671115-20673872 Arabidopsis thaliana
AT3G55700 0.5kb downstream 0.5kb downstream 500 false Chr3: 20673373-20673872 Arabidopsis thaliana
AT3G55700 1.0kb upstream 1.0kb upstream 3258 true Chr3: 20670115-20673372 Arabidopsis thaliana
AT3G55700 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20670115-20671114 Arabidopsis thaliana
AT3G55700 1.0kb downstream 1.0kb downstream 3258 true Chr3: 20671115-20674372 Arabidopsis thaliana
AT3G55700 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20673373-20674372 Arabidopsis thaliana
AT3G55700 2.0kb upstream 2.0kb upstream 4258 true Chr3: 20669115-20673372 Arabidopsis thaliana
AT3G55700 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20669115-20671114 Arabidopsis thaliana
AT3G55700 2.0kb downstream 2.0kb downstream 4258 true Chr3: 20671115-20675372 Arabidopsis thaliana
AT3G55700 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20673373-20675372 Arabidopsis thaliana
AT3G55700 5.0kb upstream 5.0kb upstream 7258 true Chr3: 20666115-20673372 Arabidopsis thaliana
AT3G55700 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20666115-20671114 Arabidopsis thaliana
AT3G55700 5.0kb downstream 5.0kb downstream 7258 true Chr3: 20671115-20678372 Arabidopsis thaliana
AT3G55700 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20673373-20678372 Arabidopsis thaliana
AT3G55700 10.0kb upstream 10.0kb upstream 12258 true Chr3: 20661115-20673372 Arabidopsis thaliana
AT3G55700 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20661115-20671114 Arabidopsis thaliana
AT3G55700 10.0kb downstream 10.0kb downstream 12258 true Chr3: 20671115-20683372 Arabidopsis thaliana
AT3G55700 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20673373-20683372 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376980 5261 Brassicaceae View MSA
123830444 5264 Brassicales-Malvales View MSA
124321674 5266 SBM View MSA
124253566 5268 Malvidae View MSA
124072411 5270 Rosid View MSA
123753607 5271 Pentapetalae View MSA
122797779 5272 Eudicot View MSA
122051696 5273 Angiosperm View MSA
121351097 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.96        
cufflinks 0.517        
cufflinks 0.191     Low Low
cufflinks 1.273       High
cufflinks 0.351        
cufflinks 0.873        

0 Strain