Gene : RBL A. thaliana TAIR10
Primary Identifier:  ? AT3G55510 Defline:  (1 of 1) PTHR12687:SF8 - NOC2P FAMILY PROTEIN
Genomic Order:  4595 Name:  ? AT3G55510
Secondary Identifier:  ? PAC:19662721
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G55510 0.5kb upstream 0.5kb upstream 3928 true Chr3: 20578478-20582405 Arabidopsis thaliana
AT3G55510 0.5kb upstream 0.5kb upstream 500 false Chr3: 20578478-20578977 Arabidopsis thaliana
AT3G55510 0.5kb downstream 0.5kb downstream 3928 true Chr3: 20578978-20582905 Arabidopsis thaliana
AT3G55510 0.5kb downstream 0.5kb downstream 500 false Chr3: 20582406-20582905 Arabidopsis thaliana
AT3G55510 1.0kb upstream 1.0kb upstream 4428 true Chr3: 20577978-20582405 Arabidopsis thaliana
AT3G55510 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20577978-20578977 Arabidopsis thaliana
AT3G55510 1.0kb downstream 1.0kb downstream 4428 true Chr3: 20578978-20583405 Arabidopsis thaliana
AT3G55510 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20582406-20583405 Arabidopsis thaliana
AT3G55510 2.0kb upstream 2.0kb upstream 5428 true Chr3: 20576978-20582405 Arabidopsis thaliana
AT3G55510 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20576978-20578977 Arabidopsis thaliana
AT3G55510 2.0kb downstream 2.0kb downstream 5428 true Chr3: 20578978-20584405 Arabidopsis thaliana
AT3G55510 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20582406-20584405 Arabidopsis thaliana
AT3G55510 5.0kb upstream 5.0kb upstream 8428 true Chr3: 20573978-20582405 Arabidopsis thaliana
AT3G55510 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20573978-20578977 Arabidopsis thaliana
AT3G55510 5.0kb downstream 5.0kb downstream 8428 true Chr3: 20578978-20587405 Arabidopsis thaliana
AT3G55510 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20582406-20587405 Arabidopsis thaliana
AT3G55510 10.0kb upstream 10.0kb upstream 13428 true Chr3: 20568978-20582405 Arabidopsis thaliana
AT3G55510 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20568978-20578977 Arabidopsis thaliana
AT3G55510 10.0kb downstream 10.0kb downstream 13428 true Chr3: 20578978-20592405 Arabidopsis thaliana
AT3G55510 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20582406-20592405 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381246 5261 Brassicaceae View MSA
123829926 5264 Brassicales-Malvales View MSA
124343125 5266 SBM View MSA
124252154 5268 Malvidae View MSA
124069127 5270 Rosid View MSA
123739521 5271 Pentapetalae View MSA
122797934 5272 Eudicot View MSA
122046727 5273 Angiosperm View MSA
121344476 5274 Embryophyte View MSA
123425551 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.852        
cufflinks 11.247        
cufflinks 5.739        
cufflinks 10.24        
cufflinks 4.192       Low
cufflinks 12.633       High

0 Strain