Gene : PAT2 A. thaliana TAIR10
Primary Identifier:  ? AT3G55480 Defline:  (1 of 1) K12397 - AP-3 complex subunit beta (AP3B)
Genomic Order:  4592 Name:  ? AT3G55480
Secondary Identifier:  ? PAC:19663865
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G55480 0.5kb upstream 0.5kb upstream 5501 true Chr3: 20566248-20571748 Arabidopsis thaliana
AT3G55480 0.5kb upstream 0.5kb upstream 500 false Chr3: 20571249-20571748 Arabidopsis thaliana
AT3G55480 0.5kb downstream 0.5kb downstream 5501 true Chr3: 20565748-20571248 Arabidopsis thaliana
AT3G55480 0.5kb downstream 0.5kb downstream 500 false Chr3: 20565748-20566247 Arabidopsis thaliana
AT3G55480 1.0kb upstream 1.0kb upstream 6001 true Chr3: 20566248-20572248 Arabidopsis thaliana
AT3G55480 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20571249-20572248 Arabidopsis thaliana
AT3G55480 1.0kb downstream 1.0kb downstream 6001 true Chr3: 20565248-20571248 Arabidopsis thaliana
AT3G55480 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20565248-20566247 Arabidopsis thaliana
AT3G55480 2.0kb upstream 2.0kb upstream 7001 true Chr3: 20566248-20573248 Arabidopsis thaliana
AT3G55480 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20571249-20573248 Arabidopsis thaliana
AT3G55480 2.0kb downstream 2.0kb downstream 7001 true Chr3: 20564248-20571248 Arabidopsis thaliana
AT3G55480 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20564248-20566247 Arabidopsis thaliana
AT3G55480 5.0kb upstream 5.0kb upstream 10001 true Chr3: 20566248-20576248 Arabidopsis thaliana
AT3G55480 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20571249-20576248 Arabidopsis thaliana
AT3G55480 5.0kb downstream 5.0kb downstream 10001 true Chr3: 20561248-20571248 Arabidopsis thaliana
AT3G55480 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20561248-20566247 Arabidopsis thaliana
AT3G55480 10.0kb upstream 10.0kb upstream 15001 true Chr3: 20566248-20581248 Arabidopsis thaliana
AT3G55480 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20571249-20581248 Arabidopsis thaliana
AT3G55480 10.0kb downstream 10.0kb downstream 15001 true Chr3: 20556248-20571248 Arabidopsis thaliana
AT3G55480 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20556248-20566247 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373035 5261 Brassicaceae View MSA
123837625 5264 Brassicales-Malvales View MSA
124337138 5266 SBM View MSA
124242688 5268 Malvidae View MSA
124063953 5270 Rosid View MSA
123736647 5271 Pentapetalae View MSA
122788279 5272 Eudicot View MSA
122042560 5273 Angiosperm View MSA
121346177 5274 Embryophyte View MSA
123425286 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.023        
cufflinks 5.145        
cufflinks 4.882        
cufflinks 5.468       High
cufflinks 4.277       Low
cufflinks 4.901        

0 Strain