Gene : AT3G55750 A. thaliana TAIR10
Defline:  (1 of 4) K02917 - large subunit ribosomal protein L35Ae (RP-L35Ae, RPL35A) Genomic Order:  4627
Name:  ? AT3G55750 Secondary Identifier:  ? PAC:19659627
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G55750 0.5kb upstream 0.5kb upstream 2015 true Chr3: 20698053-20700067 Arabidopsis thaliana
AT3G55750 0.5kb upstream 0.5kb upstream 500 false Chr3: 20698053-20698552 Arabidopsis thaliana
AT3G55750 0.5kb downstream 0.5kb downstream 2015 true Chr3: 20698553-20700567 Arabidopsis thaliana
AT3G55750 0.5kb downstream 0.5kb downstream 500 false Chr3: 20700068-20700567 Arabidopsis thaliana
AT3G55750 1.0kb upstream 1.0kb upstream 2515 true Chr3: 20697553-20700067 Arabidopsis thaliana
AT3G55750 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20697553-20698552 Arabidopsis thaliana
AT3G55750 1.0kb downstream 1.0kb downstream 2515 true Chr3: 20698553-20701067 Arabidopsis thaliana
AT3G55750 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20700068-20701067 Arabidopsis thaliana
AT3G55750 2.0kb upstream 2.0kb upstream 3515 true Chr3: 20696553-20700067 Arabidopsis thaliana
AT3G55750 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20696553-20698552 Arabidopsis thaliana
AT3G55750 2.0kb downstream 2.0kb downstream 3515 true Chr3: 20698553-20702067 Arabidopsis thaliana
AT3G55750 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20700068-20702067 Arabidopsis thaliana
AT3G55750 5.0kb upstream 5.0kb upstream 6515 true Chr3: 20693553-20700067 Arabidopsis thaliana
AT3G55750 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20693553-20698552 Arabidopsis thaliana
AT3G55750 5.0kb downstream 5.0kb downstream 6515 true Chr3: 20698553-20705067 Arabidopsis thaliana
AT3G55750 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20700068-20705067 Arabidopsis thaliana
AT3G55750 10.0kb upstream 10.0kb upstream 11515 true Chr3: 20688553-20700067 Arabidopsis thaliana
AT3G55750 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20688553-20698552 Arabidopsis thaliana
AT3G55750 10.0kb downstream 10.0kb downstream 11515 true Chr3: 20698553-20710067 Arabidopsis thaliana
AT3G55750 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20700068-20710067 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378808 5261 Brassicaceae View MSA
123801998 5264 Brassicales-Malvales View MSA
124352012 5266 SBM View MSA
124181251 5268 Malvidae View MSA
124063370 5270 Rosid View MSA
123751278 5271 Pentapetalae View MSA
122792399 5272 Eudicot View MSA
122043317 5273 Angiosperm View MSA
121349974 5274 Embryophyte View MSA
123428152 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 79.644     High  
cufflinks 87.803     High  
cufflinks 67.873     High  
cufflinks 102.858     High  
cufflinks 52.459     High Low
cufflinks 115.19     High High

0 Strain