Gene : OBP3 A. thaliana TAIR10
Primary Identifier:  ? AT3G55370 Defline:  (1 of 36) PF02701 - Dof domain, zinc finger (zf-Dof)
Genomic Order:  4581 Name:  ? AT3G55370
Secondary Identifier:  ? PAC:19662490
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G55370 0.5kb upstream 0.5kb upstream 2729 true Chr3: 20526563-20529291 Arabidopsis thaliana
AT3G55370 0.5kb upstream 0.5kb upstream 500 false Chr3: 20526563-20527062 Arabidopsis thaliana
AT3G55370 0.5kb downstream 0.5kb downstream 2729 true Chr3: 20527063-20529791 Arabidopsis thaliana
AT3G55370 0.5kb downstream 0.5kb downstream 500 false Chr3: 20529292-20529791 Arabidopsis thaliana
AT3G55370 1.0kb upstream 1.0kb upstream 3229 true Chr3: 20526063-20529291 Arabidopsis thaliana
AT3G55370 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20526063-20527062 Arabidopsis thaliana
AT3G55370 1.0kb downstream 1.0kb downstream 3229 true Chr3: 20527063-20530291 Arabidopsis thaliana
AT3G55370 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20529292-20530291 Arabidopsis thaliana
AT3G55370 2.0kb upstream 2.0kb upstream 4229 true Chr3: 20525063-20529291 Arabidopsis thaliana
AT3G55370 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20525063-20527062 Arabidopsis thaliana
AT3G55370 2.0kb downstream 2.0kb downstream 4229 true Chr3: 20527063-20531291 Arabidopsis thaliana
AT3G55370 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20529292-20531291 Arabidopsis thaliana
AT3G55370 5.0kb upstream 5.0kb upstream 7229 true Chr3: 20522063-20529291 Arabidopsis thaliana
AT3G55370 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20522063-20527062 Arabidopsis thaliana
AT3G55370 5.0kb downstream 5.0kb downstream 7229 true Chr3: 20527063-20534291 Arabidopsis thaliana
AT3G55370 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20529292-20534291 Arabidopsis thaliana
AT3G55370 10.0kb upstream 10.0kb upstream 12229 true Chr3: 20517063-20529291 Arabidopsis thaliana
AT3G55370 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20517063-20527062 Arabidopsis thaliana
AT3G55370 10.0kb downstream 10.0kb downstream 12229 true Chr3: 20527063-20539291 Arabidopsis thaliana
AT3G55370 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20529292-20539291 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369742 5261 Brassicaceae View MSA
123841352 5264 Brassicales-Malvales View MSA
124341650 5266 SBM View MSA
124248086 5268 Malvidae View MSA
124069853 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.733        
cufflinks 5.239        
cufflinks 0.691        
cufflinks 6.202        
cufflinks 0.574       Low
cufflinks 6.11        

0 Strain