Gene : PGPS2 A. thaliana TAIR10
Primary Identifier:  ? AT3G55030 Defline:  (1 of 1) PTHR14269//PTHR14269:SF20 - CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED // PHOSPHATIDYLGLYCEROLPHOSPHATE SYNTHASE 2
Genomic Order:  4546 Name:  ? AT3G55030
Secondary Identifier:  ? PAC:19663647
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY4FS-7 Arabidopsis thaliana pathologic  
Athaliana PWY-5269 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G55030 0.5kb upstream 0.5kb upstream 2394 true Chr3: 20396260-20398653 Arabidopsis thaliana
AT3G55030 0.5kb upstream 0.5kb upstream 500 false Chr3: 20396260-20396759 Arabidopsis thaliana
AT3G55030 0.5kb downstream 0.5kb downstream 2394 true Chr3: 20396760-20399153 Arabidopsis thaliana
AT3G55030 0.5kb downstream 0.5kb downstream 500 false Chr3: 20398654-20399153 Arabidopsis thaliana
AT3G55030 1.0kb upstream 1.0kb upstream 2894 true Chr3: 20395760-20398653 Arabidopsis thaliana
AT3G55030 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20395760-20396759 Arabidopsis thaliana
AT3G55030 1.0kb downstream 1.0kb downstream 2894 true Chr3: 20396760-20399653 Arabidopsis thaliana
AT3G55030 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20398654-20399653 Arabidopsis thaliana
AT3G55030 2.0kb upstream 2.0kb upstream 3894 true Chr3: 20394760-20398653 Arabidopsis thaliana
AT3G55030 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20394760-20396759 Arabidopsis thaliana
AT3G55030 2.0kb downstream 2.0kb downstream 3894 true Chr3: 20396760-20400653 Arabidopsis thaliana
AT3G55030 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20398654-20400653 Arabidopsis thaliana
AT3G55030 5.0kb upstream 5.0kb upstream 6894 true Chr3: 20391760-20398653 Arabidopsis thaliana
AT3G55030 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20391760-20396759 Arabidopsis thaliana
AT3G55030 5.0kb downstream 5.0kb downstream 6894 true Chr3: 20396760-20403653 Arabidopsis thaliana
AT3G55030 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20398654-20403653 Arabidopsis thaliana
AT3G55030 10.0kb upstream 10.0kb upstream 11894 true Chr3: 20386760-20398653 Arabidopsis thaliana
AT3G55030 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20386760-20396759 Arabidopsis thaliana
AT3G55030 10.0kb downstream 10.0kb downstream 11894 true Chr3: 20396760-20408653 Arabidopsis thaliana
AT3G55030 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20398654-20408653 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041214 5273 Angiosperm View MSA
122368221 5261 Brassicaceae View MSA
123799515 5264 Brassicales-Malvales View MSA
124297027 5266 SBM View MSA
124250044 5268 Malvidae View MSA
124064050 5270 Rosid View MSA
123750355 5271 Pentapetalae View MSA
122791473 5272 Eudicot View MSA
121349383 5274 Embryophyte View MSA
123424626 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.638        
cufflinks 14.511        
cufflinks 8.076       Low
cufflinks 14.92        
cufflinks 9.472        
cufflinks 14.33        

0 Strain