Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT3G54800 0.5kb upstream | 0.5kb | upstream | 4494 | true | Chr3: 20285584-20290077 | Arabidopsis thaliana |
AT3G54800 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr3: 20285584-20286083 | Arabidopsis thaliana |
AT3G54800 0.5kb downstream | 0.5kb | downstream | 4494 | true | Chr3: 20286084-20290577 | Arabidopsis thaliana |
AT3G54800 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr3: 20290078-20290577 | Arabidopsis thaliana |
AT3G54800 1.0kb upstream | 1.0kb | upstream | 4994 | true | Chr3: 20285084-20290077 | Arabidopsis thaliana |
AT3G54800 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr3: 20285084-20286083 | Arabidopsis thaliana |
AT3G54800 1.0kb downstream | 1.0kb | downstream | 4994 | true | Chr3: 20286084-20291077 | Arabidopsis thaliana |
AT3G54800 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr3: 20290078-20291077 | Arabidopsis thaliana |
AT3G54800 2.0kb upstream | 2.0kb | upstream | 5994 | true | Chr3: 20284084-20290077 | Arabidopsis thaliana |
AT3G54800 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr3: 20284084-20286083 | Arabidopsis thaliana |
AT3G54800 2.0kb downstream | 2.0kb | downstream | 5994 | true | Chr3: 20286084-20292077 | Arabidopsis thaliana |
AT3G54800 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr3: 20290078-20292077 | Arabidopsis thaliana |
AT3G54800 5.0kb upstream | 5.0kb | upstream | 8994 | true | Chr3: 20281084-20290077 | Arabidopsis thaliana |
AT3G54800 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr3: 20281084-20286083 | Arabidopsis thaliana |
AT3G54800 5.0kb downstream | 5.0kb | downstream | 8994 | true | Chr3: 20286084-20295077 | Arabidopsis thaliana |
AT3G54800 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr3: 20290078-20295077 | Arabidopsis thaliana |
AT3G54800 10.0kb upstream | 10.0kb | upstream | 13994 | true | Chr3: 20276084-20290077 | Arabidopsis thaliana |
AT3G54800 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr3: 20276084-20286083 | Arabidopsis thaliana |
AT3G54800 10.0kb downstream | 10.0kb | downstream | 13994 | true | Chr3: 20286084-20300077 | Arabidopsis thaliana |
AT3G54800 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr3: 20290078-20300077 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122375907 | 5261 | Brassicaceae | View MSA |
123834520 | 5264 | Brassicales-Malvales | View MSA |
124343177 | 5266 | SBM | View MSA |
124250814 | 5268 | Malvidae | View MSA |
124064744 | 5270 | Rosid | View MSA |
123746336 | 5271 | Pentapetalae | View MSA |
122790563 | 5272 | Eudicot | View MSA |
122046452 | 5273 | Angiosperm | View MSA |
121347989 | 5274 | Embryophyte | View MSA |
123428121 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.002 | Low | Low | ||
cufflinks | 0.032 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.013 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.022 | Low |