Gene : BME3 A. thaliana TAIR10
Primary Identifier:  ? AT3G54810 Defline:  (1 of 1) PTHR10071:SF194 - GATA TRANSCRIPTION FACTOR 8
Genomic Order:  4521 Name:  ? AT3G54810
Secondary Identifier:  ? PAC:19664054
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G54810 0.5kb upstream 0.5kb upstream 2960 true Chr3: 20295732-20298691 Arabidopsis thaliana
AT3G54810 0.5kb upstream 0.5kb upstream 500 false Chr3: 20295732-20296231 Arabidopsis thaliana
AT3G54810 0.5kb downstream 0.5kb downstream 2960 true Chr3: 20296232-20299191 Arabidopsis thaliana
AT3G54810 0.5kb downstream 0.5kb downstream 500 false Chr3: 20298692-20299191 Arabidopsis thaliana
AT3G54810 1.0kb upstream 1.0kb upstream 3460 true Chr3: 20295232-20298691 Arabidopsis thaliana
AT3G54810 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20295232-20296231 Arabidopsis thaliana
AT3G54810 1.0kb downstream 1.0kb downstream 3460 true Chr3: 20296232-20299691 Arabidopsis thaliana
AT3G54810 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20298692-20299691 Arabidopsis thaliana
AT3G54810 2.0kb upstream 2.0kb upstream 4460 true Chr3: 20294232-20298691 Arabidopsis thaliana
AT3G54810 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20294232-20296231 Arabidopsis thaliana
AT3G54810 2.0kb downstream 2.0kb downstream 4460 true Chr3: 20296232-20300691 Arabidopsis thaliana
AT3G54810 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20298692-20300691 Arabidopsis thaliana
AT3G54810 5.0kb upstream 5.0kb upstream 7460 true Chr3: 20291232-20298691 Arabidopsis thaliana
AT3G54810 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20291232-20296231 Arabidopsis thaliana
AT3G54810 5.0kb downstream 5.0kb downstream 7460 true Chr3: 20296232-20303691 Arabidopsis thaliana
AT3G54810 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20298692-20303691 Arabidopsis thaliana
AT3G54810 10.0kb upstream 10.0kb upstream 12460 true Chr3: 20286232-20298691 Arabidopsis thaliana
AT3G54810 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20286232-20296231 Arabidopsis thaliana
AT3G54810 10.0kb downstream 10.0kb downstream 12460 true Chr3: 20296232-20308691 Arabidopsis thaliana
AT3G54810 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20298692-20308691 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380114 5261 Brassicaceae View MSA
123827769 5264 Brassicales-Malvales View MSA
124343784 5266 SBM View MSA
124236996 5268 Malvidae View MSA
124064545 5270 Rosid View MSA
123749114 5271 Pentapetalae View MSA
122796835 5272 Eudicot View MSA
122049564 5273 Angiosperm View MSA
121349341 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.624     High  
cufflinks 60.456     High  
cufflinks 25.341        
cufflinks 54.871     High  
cufflinks 16.324       Low
cufflinks 60.69     High  

0 Strain