Gene : BZIP25 A. thaliana TAIR10
Primary Identifier:  ? AT3G54620 Defline:  (1 of 2) PTHR22952//PTHR22952:SF127 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // BASIC LEUCINE ZIPPER 10-RELATED
Genomic Order:  4500 Name:  ? AT3G54620
Secondary Identifier:  ? PAC:19662025
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G54620 0.5kb upstream 0.5kb upstream 3085 true Chr3: 20217854-20220938 Arabidopsis thaliana
AT3G54620 0.5kb upstream 0.5kb upstream 500 false Chr3: 20220439-20220938 Arabidopsis thaliana
AT3G54620 0.5kb downstream 0.5kb downstream 3085 true Chr3: 20217354-20220438 Arabidopsis thaliana
AT3G54620 0.5kb downstream 0.5kb downstream 500 false Chr3: 20217354-20217853 Arabidopsis thaliana
AT3G54620 1.0kb upstream 1.0kb upstream 3585 true Chr3: 20217854-20221438 Arabidopsis thaliana
AT3G54620 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20220439-20221438 Arabidopsis thaliana
AT3G54620 1.0kb downstream 1.0kb downstream 3585 true Chr3: 20216854-20220438 Arabidopsis thaliana
AT3G54620 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20216854-20217853 Arabidopsis thaliana
AT3G54620 2.0kb upstream 2.0kb upstream 4585 true Chr3: 20217854-20222438 Arabidopsis thaliana
AT3G54620 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20220439-20222438 Arabidopsis thaliana
AT3G54620 2.0kb downstream 2.0kb downstream 4585 true Chr3: 20215854-20220438 Arabidopsis thaliana
AT3G54620 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20215854-20217853 Arabidopsis thaliana
AT3G54620 5.0kb upstream 5.0kb upstream 7585 true Chr3: 20217854-20225438 Arabidopsis thaliana
AT3G54620 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20220439-20225438 Arabidopsis thaliana
AT3G54620 5.0kb downstream 5.0kb downstream 7585 true Chr3: 20212854-20220438 Arabidopsis thaliana
AT3G54620 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20212854-20217853 Arabidopsis thaliana
AT3G54620 10.0kb upstream 10.0kb upstream 12585 true Chr3: 20217854-20230438 Arabidopsis thaliana
AT3G54620 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20220439-20230438 Arabidopsis thaliana
AT3G54620 10.0kb downstream 10.0kb downstream 12585 true Chr3: 20207854-20220438 Arabidopsis thaliana
AT3G54620 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20207854-20217853 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360591 5261 Brassicaceae View MSA
123837478 5264 Brassicales-Malvales View MSA
124339367 5266 SBM View MSA
124245191 5268 Malvidae View MSA
124072253 5270 Rosid View MSA
123743642 5271 Pentapetalae View MSA
122785904 5272 Eudicot View MSA
122051376 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350237 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.88       Low
cufflinks 11.25        
cufflinks 6.629       Low
cufflinks 12.643       High
cufflinks 8.617        
cufflinks 10.685        

0 Strain