Gene : AT3G54510 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13018//PTHR13018:SF30 - PROBABLE MEMBRANE PROTEIN DUF221-RELATED // EARLY-RESPONSIVE TO DEHYDRATION STRESS PROTEIN (ERD4) Genomic Order:  4489
Name:  ? AT3G54510 Secondary Identifier:  ? PAC:19661741
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G54510 0.5kb upstream 0.5kb upstream 3718 true Chr3: 20179792-20183509 Arabidopsis thaliana
AT3G54510 0.5kb upstream 0.5kb upstream 500 false Chr3: 20179792-20180291 Arabidopsis thaliana
AT3G54510 0.5kb downstream 0.5kb downstream 3718 true Chr3: 20180292-20184009 Arabidopsis thaliana
AT3G54510 0.5kb downstream 0.5kb downstream 500 false Chr3: 20183510-20184009 Arabidopsis thaliana
AT3G54510 1.0kb upstream 1.0kb upstream 4218 true Chr3: 20179292-20183509 Arabidopsis thaliana
AT3G54510 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20179292-20180291 Arabidopsis thaliana
AT3G54510 1.0kb downstream 1.0kb downstream 4218 true Chr3: 20180292-20184509 Arabidopsis thaliana
AT3G54510 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20183510-20184509 Arabidopsis thaliana
AT3G54510 2.0kb upstream 2.0kb upstream 5218 true Chr3: 20178292-20183509 Arabidopsis thaliana
AT3G54510 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20178292-20180291 Arabidopsis thaliana
AT3G54510 2.0kb downstream 2.0kb downstream 5218 true Chr3: 20180292-20185509 Arabidopsis thaliana
AT3G54510 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20183510-20185509 Arabidopsis thaliana
AT3G54510 5.0kb upstream 5.0kb upstream 8218 true Chr3: 20175292-20183509 Arabidopsis thaliana
AT3G54510 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20175292-20180291 Arabidopsis thaliana
AT3G54510 5.0kb downstream 5.0kb downstream 8218 true Chr3: 20180292-20188509 Arabidopsis thaliana
AT3G54510 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20183510-20188509 Arabidopsis thaliana
AT3G54510 10.0kb upstream 10.0kb upstream 13218 true Chr3: 20170292-20183509 Arabidopsis thaliana
AT3G54510 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20170292-20180291 Arabidopsis thaliana
AT3G54510 10.0kb downstream 10.0kb downstream 13218 true Chr3: 20180292-20193509 Arabidopsis thaliana
AT3G54510 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20183510-20193509 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028759 5273 Angiosperm View MSA
122362133 5261 Brassicaceae View MSA
123833425 5264 Brassicales-Malvales View MSA
124340302 5266 SBM View MSA
124240921 5268 Malvidae View MSA
124074447 5270 Rosid View MSA
123736655 5271 Pentapetalae View MSA
122787942 5272 Eudicot View MSA
123429118 5275 Viridiplantae View MSA
121349616 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.018     Low High
cufflinks 0.012     Low  
cufflinks 0.009     Low Low
cufflinks 0.015     Low  
cufflinks 0.011     Low  
cufflinks 0.012     Low  

0 Strain