Gene : AT3G59910 A. thaliana TAIR10
Defline:  (1 of 1) PTHR36024//PTHR36024:SF1 - FAMILY NOT NAMED // ANKYRIN REPEAT PROTEIN SKIP35 Genomic Order:  5047
Name:  ? AT3G59910 Secondary Identifier:  ? PAC:19662179
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G59910 0.5kb upstream 0.5kb upstream 3601 true Chr3: 22130483-22134083 Arabidopsis thaliana
AT3G59910 0.5kb upstream 0.5kb upstream 500 false Chr3: 22133584-22134083 Arabidopsis thaliana
AT3G59910 0.5kb downstream 0.5kb downstream 3601 true Chr3: 22129983-22133583 Arabidopsis thaliana
AT3G59910 0.5kb downstream 0.5kb downstream 500 false Chr3: 22129983-22130482 Arabidopsis thaliana
AT3G59910 1.0kb upstream 1.0kb upstream 4101 true Chr3: 22130483-22134583 Arabidopsis thaliana
AT3G59910 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22133584-22134583 Arabidopsis thaliana
AT3G59910 1.0kb downstream 1.0kb downstream 4101 true Chr3: 22129483-22133583 Arabidopsis thaliana
AT3G59910 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22129483-22130482 Arabidopsis thaliana
AT3G59910 2.0kb upstream 2.0kb upstream 5101 true Chr3: 22130483-22135583 Arabidopsis thaliana
AT3G59910 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22133584-22135583 Arabidopsis thaliana
AT3G59910 2.0kb downstream 2.0kb downstream 5101 true Chr3: 22128483-22133583 Arabidopsis thaliana
AT3G59910 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22128483-22130482 Arabidopsis thaliana
AT3G59910 5.0kb upstream 5.0kb upstream 8101 true Chr3: 22130483-22138583 Arabidopsis thaliana
AT3G59910 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22133584-22138583 Arabidopsis thaliana
AT3G59910 5.0kb downstream 5.0kb downstream 8101 true Chr3: 22125483-22133583 Arabidopsis thaliana
AT3G59910 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22125483-22130482 Arabidopsis thaliana
AT3G59910 10.0kb upstream 10.0kb upstream 13101 true Chr3: 22130483-22143583 Arabidopsis thaliana
AT3G59910 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22133584-22143583 Arabidopsis thaliana
AT3G59910 10.0kb downstream 10.0kb downstream 13101 true Chr3: 22120483-22133583 Arabidopsis thaliana
AT3G59910 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22120483-22130482 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368882 5261 Brassicaceae View MSA
123831379 5264 Brassicales-Malvales View MSA
124342317 5266 SBM View MSA
124247524 5268 Malvidae View MSA
124050252 5270 Rosid View MSA
123738078 5271 Pentapetalae View MSA
122791411 5272 Eudicot View MSA
122050992 5273 Angiosperm View MSA
121347719 5274 Embryophyte View MSA
123380606 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.633        
cufflinks 28.226       High
cufflinks 18.232        
cufflinks 26.011        
cufflinks 16.831       Low
cufflinks 24.898        

0 Strain