Gene : AT3G59650 A. thaliana TAIR10
Defline:  (1 of 1) K17424 - large subunit ribosomal protein L43 (MRPL43) Genomic Order:  5022
Name:  ? AT3G59650 Secondary Identifier:  ? PAC:19663030
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G59650 0.5kb upstream 0.5kb upstream 1529 true Chr3: 22032629-22034157 Arabidopsis thaliana
AT3G59650 0.5kb upstream 0.5kb upstream 500 false Chr3: 22032629-22033128 Arabidopsis thaliana
AT3G59650 0.5kb downstream 0.5kb downstream 1529 true Chr3: 22033129-22034657 Arabidopsis thaliana
AT3G59650 0.5kb downstream 0.5kb downstream 500 false Chr3: 22034158-22034657 Arabidopsis thaliana
AT3G59650 1.0kb upstream 1.0kb upstream 2029 true Chr3: 22032129-22034157 Arabidopsis thaliana
AT3G59650 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22032129-22033128 Arabidopsis thaliana
AT3G59650 1.0kb downstream 1.0kb downstream 2029 true Chr3: 22033129-22035157 Arabidopsis thaliana
AT3G59650 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22034158-22035157 Arabidopsis thaliana
AT3G59650 2.0kb upstream 2.0kb upstream 3029 true Chr3: 22031129-22034157 Arabidopsis thaliana
AT3G59650 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22031129-22033128 Arabidopsis thaliana
AT3G59650 2.0kb downstream 2.0kb downstream 3029 true Chr3: 22033129-22036157 Arabidopsis thaliana
AT3G59650 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22034158-22036157 Arabidopsis thaliana
AT3G59650 5.0kb upstream 5.0kb upstream 6029 true Chr3: 22028129-22034157 Arabidopsis thaliana
AT3G59650 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22028129-22033128 Arabidopsis thaliana
AT3G59650 5.0kb downstream 5.0kb downstream 6029 true Chr3: 22033129-22039157 Arabidopsis thaliana
AT3G59650 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22034158-22039157 Arabidopsis thaliana
AT3G59650 10.0kb upstream 10.0kb upstream 11029 true Chr3: 22023129-22034157 Arabidopsis thaliana
AT3G59650 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22023129-22033128 Arabidopsis thaliana
AT3G59650 10.0kb downstream 10.0kb downstream 11029 true Chr3: 22033129-22044157 Arabidopsis thaliana
AT3G59650 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22034158-22044157 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330119 5261 Brassicaceae Singleton cluster - no MSA
123836683 5264 Brassicales-Malvales View MSA
124342019 5266 SBM View MSA
124242046 5268 Malvidae View MSA
124074566 5270 Rosid View MSA
123745726 5271 Pentapetalae View MSA
122791499 5272 Eudicot View MSA
122046587 5273 Angiosperm View MSA
121350203 5274 Embryophyte View MSA
123428774 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.159        
cufflinks 6.784        
cufflinks 4.327        
cufflinks 7.089        
cufflinks 3.018       Low
cufflinks 8.722       High

0 Strain