Gene : NRPB8B A. thaliana TAIR10
Primary Identifier:  ? AT3G59600 Defline:  (1 of 2) K03016 - DNA-directed RNA polymerases I, II, and III subunit RPABC3 (RPB8, POLR2H)
Genomic Order:  5017 Name:  ? AT3G59600
Secondary Identifier:  ? PAC:19659793
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G59600 0.5kb upstream 0.5kb upstream 2216 true Chr3: 22015885-22018100 Arabidopsis thaliana
AT3G59600 0.5kb upstream 0.5kb upstream 500 false Chr3: 22015885-22016384 Arabidopsis thaliana
AT3G59600 0.5kb downstream 0.5kb downstream 2216 true Chr3: 22016385-22018600 Arabidopsis thaliana
AT3G59600 0.5kb downstream 0.5kb downstream 500 false Chr3: 22018101-22018600 Arabidopsis thaliana
AT3G59600 1.0kb upstream 1.0kb upstream 2716 true Chr3: 22015385-22018100 Arabidopsis thaliana
AT3G59600 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22015385-22016384 Arabidopsis thaliana
AT3G59600 1.0kb downstream 1.0kb downstream 2716 true Chr3: 22016385-22019100 Arabidopsis thaliana
AT3G59600 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22018101-22019100 Arabidopsis thaliana
AT3G59600 2.0kb upstream 2.0kb upstream 3716 true Chr3: 22014385-22018100 Arabidopsis thaliana
AT3G59600 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22014385-22016384 Arabidopsis thaliana
AT3G59600 2.0kb downstream 2.0kb downstream 3716 true Chr3: 22016385-22020100 Arabidopsis thaliana
AT3G59600 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22018101-22020100 Arabidopsis thaliana
AT3G59600 5.0kb upstream 5.0kb upstream 6716 true Chr3: 22011385-22018100 Arabidopsis thaliana
AT3G59600 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22011385-22016384 Arabidopsis thaliana
AT3G59600 5.0kb downstream 5.0kb downstream 6716 true Chr3: 22016385-22023100 Arabidopsis thaliana
AT3G59600 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22018101-22023100 Arabidopsis thaliana
AT3G59600 10.0kb upstream 10.0kb upstream 11716 true Chr3: 22006385-22018100 Arabidopsis thaliana
AT3G59600 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22006385-22016384 Arabidopsis thaliana
AT3G59600 10.0kb downstream 10.0kb downstream 11716 true Chr3: 22016385-22028100 Arabidopsis thaliana
AT3G59600 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22018101-22028100 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381508 5261 Brassicaceae View MSA
123841702 5264 Brassicales-Malvales View MSA
124346830 5266 SBM View MSA
124242683 5268 Malvidae View MSA
124064544 5270 Rosid View MSA
123742765 5271 Pentapetalae View MSA
122785974 5272 Eudicot View MSA
122051264 5273 Angiosperm View MSA
121346486 5274 Embryophyte View MSA
123424696 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.647        
cufflinks 19.343        
cufflinks 19.604        
cufflinks 18.825        
cufflinks 19.677        
cufflinks 16.9       Low

0 Strain