Gene : AT3G59140 A. thaliana TAIR10
Defline:  (1 of 1) PTHR24223//PTHR24223:SF192 - FAMILY NOT NAMED // ABC TRANSPORTER C FAMILY MEMBER 10 Genomic Order:  4971
Name:  ? AT3G59140 Secondary Identifier:  ? PAC:19663037
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G59140 0.5kb upstream 0.5kb upstream 5782 true Chr3: 21863420-21869201 Arabidopsis thaliana
AT3G59140 0.5kb upstream 0.5kb upstream 500 false Chr3: 21868702-21869201 Arabidopsis thaliana
AT3G59140 0.5kb downstream 0.5kb downstream 5782 true Chr3: 21862920-21868701 Arabidopsis thaliana
AT3G59140 0.5kb downstream 0.5kb downstream 500 false Chr3: 21862920-21863419 Arabidopsis thaliana
AT3G59140 1.0kb upstream 1.0kb upstream 6282 true Chr3: 21863420-21869701 Arabidopsis thaliana
AT3G59140 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21868702-21869701 Arabidopsis thaliana
AT3G59140 1.0kb downstream 1.0kb downstream 6282 true Chr3: 21862420-21868701 Arabidopsis thaliana
AT3G59140 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21862420-21863419 Arabidopsis thaliana
AT3G59140 2.0kb upstream 2.0kb upstream 7282 true Chr3: 21863420-21870701 Arabidopsis thaliana
AT3G59140 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21868702-21870701 Arabidopsis thaliana
AT3G59140 2.0kb downstream 2.0kb downstream 7282 true Chr3: 21861420-21868701 Arabidopsis thaliana
AT3G59140 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21861420-21863419 Arabidopsis thaliana
AT3G59140 5.0kb upstream 5.0kb upstream 10282 true Chr3: 21863420-21873701 Arabidopsis thaliana
AT3G59140 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21868702-21873701 Arabidopsis thaliana
AT3G59140 5.0kb downstream 5.0kb downstream 10282 true Chr3: 21858420-21868701 Arabidopsis thaliana
AT3G59140 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21858420-21863419 Arabidopsis thaliana
AT3G59140 10.0kb upstream 10.0kb upstream 15282 true Chr3: 21863420-21878701 Arabidopsis thaliana
AT3G59140 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21868702-21878701 Arabidopsis thaliana
AT3G59140 10.0kb downstream 10.0kb downstream 15282 true Chr3: 21853420-21868701 Arabidopsis thaliana
AT3G59140 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21853420-21863419 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363974 5261 Brassicaceae View MSA
123829801 5264 Brassicales-Malvales View MSA
124338032 5266 SBM View MSA
124242185 5268 Malvidae View MSA
124062528 5270 Rosid View MSA
123749567 5271 Pentapetalae View MSA
122793261 5272 Eudicot View MSA
122043507 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121346879 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.975        
cufflinks 0.558       Low
cufflinks 5.392        
cufflinks 2.164        
cufflinks 7.236       High
cufflinks 0.773       Low

0 Strain